BLASTX nr result

ID: Coptis24_contig00037794 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037794
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525575.1| serine-threonine protein kinase, plant-type,...    99   5e-19
ref|XP_002272787.2| PREDICTED: inactive protein kinase SELMODRAF...    95   5e-18
emb|CAN78896.1| hypothetical protein VITISV_025420 [Vitis vinifera]    95   5e-18
ref|XP_002299169.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002266741.2| PREDICTED: uncharacterized protein LOC100246...    87   2e-15

>ref|XP_002525575.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223535154|gb|EEF36834.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 726

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
 Frame = +3

Query: 108 GWPT-EAFENSICSVCQNERPRIGWQRDFTYAELQAATDGFSEETFLSEGGFGSVYRGRL 284
           G PT E F NS+CS+C+N RPRIGW+RDFTYAEL AAT+GFS + FLSEGGFGSVYRG L
Sbjct: 336 GGPTDEMFNNSVCSICKNRRPRIGWKRDFTYAELHAATEGFSPKNFLSEGGFGSVYRGEL 395


>ref|XP_002272787.2| PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Vitis
           vinifera]
          Length = 714

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/59 (69%), Positives = 50/59 (84%)
 Frame = +3

Query: 114 PTEAFENSICSVCQNERPRIGWQRDFTYAELQAATDGFSEETFLSEGGFGSVYRGRLKD 290
           P E F NS C+VC+N RP+IGW++DFTYAELQAAT+GF+ E FLSEGGFG VY G+LK+
Sbjct: 294 PEEIFRNSSCTVCKNRRPKIGWKKDFTYAELQAATEGFASENFLSEGGFGPVYGGQLKN 352


>emb|CAN78896.1| hypothetical protein VITISV_025420 [Vitis vinifera]
          Length = 648

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 41/59 (69%), Positives = 50/59 (84%)
 Frame = +3

Query: 114 PTEAFENSICSVCQNERPRIGWQRDFTYAELQAATDGFSEETFLSEGGFGSVYRGRLKD 290
           P E F NS C+VC+N RP+IGW++DFTYAELQAAT+GF+ E FLSEGGFG VY G+LK+
Sbjct: 228 PEEIFRNSSCTVCKNRRPKIGWKKDFTYAELQAATEGFASENFLSEGGFGPVYGGQLKN 286


>ref|XP_002299169.1| predicted protein [Populus trichocarpa] gi|222846427|gb|EEE83974.1|
           predicted protein [Populus trichocarpa]
          Length = 308

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 40/55 (72%), Positives = 47/55 (85%)
 Frame = +3

Query: 120 EAFENSICSVCQNERPRIGWQRDFTYAELQAATDGFSEETFLSEGGFGSVYRGRL 284
           E F NSICSVC+N RP+IGW+RDF+YAE+ AAT+G S+  FLSEGGFGSVYRG L
Sbjct: 8   EVFRNSICSVCKNRRPKIGWKRDFSYAEIHAATEGSSQTKFLSEGGFGSVYRGDL 62


>ref|XP_002266741.2| PREDICTED: uncharacterized protein LOC100246128 [Vitis vinifera]
          Length = 672

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/85 (49%), Positives = 58/85 (68%)
 Frame = +3

Query: 36  DTRTQDQEWMLSYSNEDLVAPGAPGWPTEAFENSICSVCQNERPRIGWQRDFTYAELQAA 215
           D + +DQ  M   S ED++         E F++ ICS+C+N +P+ GW+RDF+YAEL AA
Sbjct: 340 DQKREDQRLMQRNSTEDVMEGQQI---EEMFDHLICSICKNRKPKEGWKRDFSYAELLAA 396

Query: 216 TDGFSEETFLSEGGFGSVYRGRLKD 290
           TDGFS + FLSEGG G V+ G+LK+
Sbjct: 397 TDGFSAKNFLSEGGLGPVFSGQLKN 421


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