BLASTX nr result

ID: Coptis24_contig00037777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037777
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632560.1| PREDICTED: uncharacterized protein LOC100854...    64   1e-08
ref|XP_002322766.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002524097.1| conserved hypothetical protein [Ricinus comm...    59   4e-07
ref|XP_002309265.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002879580.1| hypothetical protein ARALYDRAFT_482556 [Arab...    55   6e-06

>ref|XP_003632560.1| PREDICTED: uncharacterized protein LOC100854533 [Vitis vinifera]
           gi|296089347|emb|CBI39119.3| unnamed protein product
           [Vitis vinifera]
          Length = 120

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/40 (82%), Positives = 36/40 (90%), Gaps = 2/40 (5%)
 Frame = -1

Query: 114 MESSAG--VGFMAVFAVSGSVVLVAMQLHKRLLSDFMKKV 1
           ME SAG  VGFMAVFAVSGS VL+A+QLHKRLLSDFMKK+
Sbjct: 1   MEGSAGIGVGFMAVFAVSGSAVLIALQLHKRLLSDFMKKI 40


>ref|XP_002322766.1| predicted protein [Populus trichocarpa] gi|222867396|gb|EEF04527.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -1

Query: 114 MESSAGVGFMAVFAVSGSVVLVAMQLHKRLLSDFMKKV 1
           M+ S G+GFMA FAVSGSVVL+A Q+HKRLLSDFMKK+
Sbjct: 1   MQGSMGLGFMAAFAVSGSVVLIARQVHKRLLSDFMKKM 38


>ref|XP_002524097.1| conserved hypothetical protein [Ricinus communis]
           gi|223536665|gb|EEF38307.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 145

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/36 (75%), Positives = 33/36 (91%)
 Frame = -1

Query: 108 SSAGVGFMAVFAVSGSVVLVAMQLHKRLLSDFMKKV 1
           S+ G+GFMA FAVSGSVVL+A Q+HKRL+SDFMKK+
Sbjct: 8   STMGLGFMAAFAVSGSVVLIARQVHKRLVSDFMKKI 43


>ref|XP_002309265.1| predicted protein [Populus trichocarpa] gi|222855241|gb|EEE92788.1|
           predicted protein [Populus trichocarpa]
          Length = 89

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -1

Query: 114 MESSAGVGFMAVFAVSGSVVLVAMQLHKRLLSDFMKKV 1
           M    G+GFMA FAVSGS+VL+A QLHKRLLSDFMK++
Sbjct: 1   MAGYLGIGFMAAFAVSGSLVLIARQLHKRLLSDFMKQM 38


>ref|XP_002879580.1| hypothetical protein ARALYDRAFT_482556 [Arabidopsis lyrata subsp.
           lyrata] gi|297325419|gb|EFH55839.1| hypothetical protein
           ARALYDRAFT_482556 [Arabidopsis lyrata subsp. lyrata]
          Length = 82

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -1

Query: 114 MESSAGVGFMAVFAVSGSVVLVAMQLHKRLLSDFMKKV 1
           MESS  +GFM VFAVSGSVVL+A QLHKRLLSD+M K+
Sbjct: 1   MESS--IGFMTVFAVSGSVVLLAAQLHKRLLSDYMDKL 36