BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037757
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation spec...   155   3e-36
ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation spec...   152   3e-35
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261...   152   3e-35
emb|CBI26829.3| unnamed protein product [Vitis vinifera]              152   3e-35
ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35

>ref|XP_003578085.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Brachypodium distachyon]
          Length = 553

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/87 (82%), Positives = 77/87 (88%), Gaps = 4/87 (4%)
 Frame = +3

Query: 93  IECLVLGAGQEVGKSCVIVTIGGKRIMFDCGMHMGYLDERRYPDFSRI----PNATDFTK 260
           IECLVLGAGQEVGKSCV+VTIGGKRIMFDCGMHMGY D  RYPDF+RI    P  TDFT 
Sbjct: 3   IECLVLGAGQEVGKSCVVVTIGGKRIMFDCGMHMGYHDCNRYPDFARILAAAPETTDFTS 62

Query: 261 SITCIIITHFHLDHIGALPYFTEVCGY 341
           +I+C+IITHFHLDHIGALPYFTEVCGY
Sbjct: 63  AISCVIITHFHLDHIGALPYFTEVCGY 89


>ref|XP_004148116.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-II-like [Cucumis sativus]
          Length = 649

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/84 (79%), Positives = 76/84 (90%)
 Frame = +3

Query: 93  IECLVLGAGQEVGKSCVIVTIGGKRIMFDCGMHMGYLDERRYPDFSRIPNATDFTKSITC 272
           I+CLVLGAGQEVGKSCV+VTI GKRIMFDCGMH+GY+D RRYPDFSRI  + D+   ++C
Sbjct: 3   IDCLVLGAGQEVGKSCVVVTINGKRIMFDCGMHLGYVDHRRYPDFSRISASHDYNNVLSC 62

Query: 273 IIITHFHLDHIGALPYFTEVCGYD 344
           IIITHFHLDHIGALPYFTEVCGY+
Sbjct: 63  IIITHFHLDHIGALPYFTEVCGYN 86


>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
          Length = 2299

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/83 (80%), Positives = 73/83 (87%)
 Frame = +3

Query: 93  IECLVLGAGQEVGKSCVIVTIGGKRIMFDCGMHMGYLDERRYPDFSRIPNATDFTKSITC 272
           IECLVLGAGQEVGKSC +VTI GKRIMFDCGMHMGYLD RR+PDFS I  + DF  +I C
Sbjct: 3   IECLVLGAGQEVGKSCAVVTINGKRIMFDCGMHMGYLDHRRFPDFSLISKSADFNTAIDC 62

Query: 273 IIITHFHLDHIGALPYFTEVCGY 341
           I+ITHFHLDH+GALPYFTEVCGY
Sbjct: 63  IVITHFHLDHVGALPYFTEVCGY 85


>emb|CBI26829.3| unnamed protein product [Vitis vinifera]
          Length = 686

 Score =  152 bits (384), Expect = 3e-35
 Identities = 67/83 (80%), Positives = 73/83 (87%)
 Frame = +3

Query: 93  IECLVLGAGQEVGKSCVIVTIGGKRIMFDCGMHMGYLDERRYPDFSRIPNATDFTKSITC 272
           IECLVLGAGQEVGKSC +VTI GKRIMFDCGMHMGYLD RR+PDFS I  + DF  +I C
Sbjct: 3   IECLVLGAGQEVGKSCAVVTINGKRIMFDCGMHMGYLDHRRFPDFSLISKSADFNTAIDC 62

Query: 273 IIITHFHLDHIGALPYFTEVCGY 341
           I+ITHFHLDH+GALPYFTEVCGY
Sbjct: 63  IVITHFHLDHVGALPYFTEVCGY 85


>ref|XP_002314781.1| predicted protein [Populus trichocarpa] gi|222863821|gb|EEF00952.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score =  152 bits (384), Expect = 3e-35
 Identities = 68/84 (80%), Positives = 74/84 (88%)
 Frame = +3

Query: 93  IECLVLGAGQEVGKSCVIVTIGGKRIMFDCGMHMGYLDERRYPDFSRIPNATDFTKSITC 272
           IECLVLGAGQEVGKSCV+VTI GKRIMFDCGMHMGY D RRYPDFS I  + DF  S+ C
Sbjct: 3   IECLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYDDHRRYPDFSLISKSRDFDHSLDC 62

Query: 273 IIITHFHLDHIGALPYFTEVCGYD 344
           +IITHFHLDH+GALPYFTEVCGY+
Sbjct: 63  VIITHFHLDHVGALPYFTEVCGYN 86