BLASTX nr result

ID: Coptis24_contig00037750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037750
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327484.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   134   8e-30
ref|XP_002305261.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
emb|CBI20026.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29

>ref|XP_002327484.1| predicted protein [Populus trichocarpa] gi|222836038|gb|EEE74459.1|
           predicted protein [Populus trichocarpa]
          Length = 486

 Score =  136 bits (343), Expect = 2e-30
 Identities = 58/76 (76%), Positives = 68/76 (89%)
 Frame = +3

Query: 3   NDEMRDHLFQLLGTSFFPRWKEKHQVRYTASREGVSLQMPPLYSMVIQESERGNWHIPMV 182
           NDEMRDHLFQLLGTSFFPRWKEKHQVR + SR G++LQMPP YS+VIQESE G+WH+P  
Sbjct: 407 NDEMRDHLFQLLGTSFFPRWKEKHQVRLSVSRSGIALQMPPPYSIVIQESENGSWHVPTT 466

Query: 183 TSDDIDTPRQWVCAAR 230
           T+DD++TPRQW+CA R
Sbjct: 467 TNDDLETPRQWLCATR 482


>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score =  134 bits (337), Expect = 8e-30
 Identities = 56/76 (73%), Positives = 68/76 (89%)
 Frame = +3

Query: 3   NDEMRDHLFQLLGTSFFPRWKEKHQVRYTASREGVSLQMPPLYSMVIQESERGNWHIPMV 182
           NDEMRDHLFQLLGTSFFPRWKEKHQVR + SR G++L MPP YS+VIQESE G+WH+P +
Sbjct: 507 NDEMRDHLFQLLGTSFFPRWKEKHQVRLSVSRSGIALHMPPPYSIVIQESENGSWHVPTI 566

Query: 183 TSDDIDTPRQWVCAAR 230
           + DD++TPRQW+CA+R
Sbjct: 567 SEDDLETPRQWLCASR 582


>ref|XP_002305261.1| predicted protein [Populus trichocarpa] gi|222848225|gb|EEE85772.1|
           predicted protein [Populus trichocarpa]
          Length = 516

 Score =  134 bits (336), Expect = 1e-29
 Identities = 57/76 (75%), Positives = 65/76 (85%)
 Frame = +3

Query: 3   NDEMRDHLFQLLGTSFFPRWKEKHQVRYTASREGVSLQMPPLYSMVIQESERGNWHIPMV 182
           NDEMRDHLFQLLGTSFFPRWKEKHQVR + SR G++L MPP YS+VIQESE G WH+P  
Sbjct: 437 NDEMRDHLFQLLGTSFFPRWKEKHQVRLSVSRSGIALHMPPPYSIVIQESENGGWHVPTT 496

Query: 183 TSDDIDTPRQWVCAAR 230
           T DD++TPRQW+CA R
Sbjct: 497 TGDDLETPRQWLCATR 512


>emb|CBI20026.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  133 bits (334), Expect = 2e-29
 Identities = 58/76 (76%), Positives = 66/76 (86%)
 Frame = +3

Query: 3   NDEMRDHLFQLLGTSFFPRWKEKHQVRYTASREGVSLQMPPLYSMVIQESERGNWHIPMV 182
           NDEMRDHLFQLLGTSFFPRWKEKHQVR T +R G  L MPP YS+VIQESE+G+WH+P V
Sbjct: 252 NDEMRDHLFQLLGTSFFPRWKEKHQVRLTITRRGPVLHMPPPYSIVIQESEQGSWHVPTV 311

Query: 183 TSDDIDTPRQWVCAAR 230
           T DD++TPRQW+CA R
Sbjct: 312 TGDDLETPRQWLCATR 327


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  133 bits (334), Expect = 2e-29
 Identities = 58/76 (76%), Positives = 66/76 (86%)
 Frame = +3

Query: 3   NDEMRDHLFQLLGTSFFPRWKEKHQVRYTASREGVSLQMPPLYSMVIQESERGNWHIPMV 182
           NDEMRDHLFQLLGTSFFPRWKEKHQVR T +R G  L MPP YS+VIQESE+G+WH+P V
Sbjct: 439 NDEMRDHLFQLLGTSFFPRWKEKHQVRLTITRRGPVLHMPPPYSIVIQESEQGSWHVPTV 498

Query: 183 TSDDIDTPRQWVCAAR 230
           T DD++TPRQW+CA R
Sbjct: 499 TGDDLETPRQWLCATR 514


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