BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037729
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containi...   151   6e-35
emb|CBI22251.3| unnamed protein product [Vitis vinifera]              151   6e-35
emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]   149   3e-34
ref|XP_002530005.1| pentatricopeptide repeat-containing protein,...   143   2e-32
ref|XP_002323876.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 663

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/85 (82%), Positives = 75/85 (88%)
 Frame = +3

Query: 3   DVVSWTTMISGYCQAKRSSEALELFGEMRDSGIRPDEVTMVSVISACTNSGDLEAGLNVH 182
           DVVSWT M+SGY QAKRS EALELF EMRD G+RPDEV MVSVISACT+ GDLE G  VH
Sbjct: 382 DVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVH 441

Query: 183 KYIDENGFGWMISLCNALIDMYAKC 257
           +YIDENGFGWM+SLCNALIDMYAKC
Sbjct: 442 RYIDENGFGWMVSLCNALIDMYAKC 466


>emb|CBI22251.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  151 bits (381), Expect = 6e-35
 Identities = 70/85 (82%), Positives = 75/85 (88%)
 Frame = +3

Query: 3   DVVSWTTMISGYCQAKRSSEALELFGEMRDSGIRPDEVTMVSVISACTNSGDLEAGLNVH 182
           DVVSWT M+SGY QAKRS EALELF EMRD G+RPDEV MVSVISACT+ GDLE G  VH
Sbjct: 195 DVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVH 254

Query: 183 KYIDENGFGWMISLCNALIDMYAKC 257
           +YIDENGFGWM+SLCNALIDMYAKC
Sbjct: 255 RYIDENGFGWMVSLCNALIDMYAKC 279


>emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
          Length = 722

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/85 (81%), Positives = 74/85 (87%)
 Frame = +3

Query: 3   DVVSWTTMISGYCQAKRSSEALELFGEMRDSGIRPDEVTMVSVISACTNSGDLEAGLNVH 182
           DVVSWT M+SGY QAKRS EALELF EMRD G+RPDEV MV VISACT+ GDLE G  VH
Sbjct: 441 DVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVH 500

Query: 183 KYIDENGFGWMISLCNALIDMYAKC 257
           +YIDENGFGWM+SLCNALIDMYAKC
Sbjct: 501 RYIDENGFGWMVSLCNALIDMYAKC 525


>ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530484|gb|EEF32367.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 499

 Score =  143 bits (360), Expect = 2e-32
 Identities = 66/85 (77%), Positives = 75/85 (88%)
 Frame = +3

Query: 3   DVVSWTTMISGYCQAKRSSEALELFGEMRDSGIRPDEVTMVSVISACTNSGDLEAGLNVH 182
           DVVSWT M+SGY +A  S EALELF EM D+GIRPDEVT+VSVISACTN GD+E G+NVH
Sbjct: 218 DVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACTNLGDVETGMNVH 277

Query: 183 KYIDENGFGWMISLCNALIDMYAKC 257
            YI+ENGFGWM+SLCNALI+MYAKC
Sbjct: 278 SYINENGFGWMVSLCNALINMYAKC 302


>ref|XP_002323876.1| predicted protein [Populus trichocarpa] gi|222866878|gb|EEF04009.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/85 (76%), Positives = 72/85 (84%)
 Frame = +3

Query: 3   DVVSWTTMISGYCQAKRSSEALELFGEMRDSGIRPDEVTMVSVISACTNSGDLEAGLNVH 182
           DVVSWTTM+S Y QAK S EALEL+  M D G+RPDEVT+VSVISACTN GDL+ G +VH
Sbjct: 167 DVVSWTTMVSAYSQAKYSREALELYVTMLDKGVRPDEVTLVSVISACTNLGDLQMGYSVH 226

Query: 183 KYIDENGFGWMISLCNALIDMYAKC 257
            YIDENGF WM+SLCNALIDMYAKC
Sbjct: 227 SYIDENGFRWMVSLCNALIDMYAKC 251