BLASTX nr result

ID: Coptis24_contig00037716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037716
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64669.1| hypothetical protein VITISV_002094 [Vitis vinifera]    46   2e-09
emb|CAN67520.1| hypothetical protein VITISV_006825 [Vitis vinifera]    50   1e-08
emb|CAN75317.1| hypothetical protein VITISV_026155 [Vitis vinifera]    50   1e-08
emb|CAN80153.1| hypothetical protein VITISV_037499 [Vitis vinifera]    45   2e-08
emb|CAN72557.1| hypothetical protein VITISV_013403 [Vitis vinifera]    48   3e-08

>emb|CAN64669.1| hypothetical protein VITISV_002094 [Vitis vinifera]
          Length = 716

 Score = 46.2 bits (108), Expect(2) = 2e-09
 Identities = 22/45 (48%), Positives = 28/45 (62%)
 Frame = +2

Query: 2   CQADSFPCTYLGLPLGADVRSKYIWDPVIERFQHKLAG*RCRYLS 136
           C    FP +YL LPLGA  RS  +WD + ERF+ KL   + +YLS
Sbjct: 244 CNVGRFPTSYLHLPLGAPHRSIGVWDVIEERFKRKLVAWKKQYLS 288



 Score = 40.4 bits (93), Expect(2) = 2e-09
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = +3

Query: 138 GRLVLIKSTLSSLPVYFCLFLSFPK 212
           GRLVLIKSTLSSLP+YF  F   PK
Sbjct: 291 GRLVLIKSTLSSLPIYFTSFFVIPK 315


>emb|CAN67520.1| hypothetical protein VITISV_006825 [Vitis vinifera]
          Length = 1509

 Score = 50.4 bits (119), Expect(2) = 1e-08
 Identities = 24/45 (53%), Positives = 31/45 (68%)
 Frame = +2

Query: 2    CQADSFPCTYLGLPLGADVRSKYIWDPVIERFQHKLAG*RCRYLS 136
            C+  S P TYLGLPLGA  +S  +WD V ERF+ +LA  + +YLS
Sbjct: 1413 CRVGSLPSTYLGLPLGAPFKSVSVWDGVEERFRKRLAMWKRQYLS 1457



 Score = 33.5 bits (75), Expect(2) = 1e-08
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = +3

Query: 138  GRLVLIKSTLSSLPVYFCLFLSFPKVLLTTLKEL 239
            GR  LI+STLS+LP+YF   L  P      L+++
Sbjct: 1460 GRATLIRSTLSNLPIYFMSLLKLPSSXKRRLEQI 1493


>emb|CAN75317.1| hypothetical protein VITISV_026155 [Vitis vinifera]
          Length = 363

 Score = 49.7 bits (117), Expect(2) = 1e-08
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = +2

Query: 2   CQADSFPCTYLGLPLGADVRSKYIWDPVIERFQHKLAG*RCRYLS 136
           C+  S P  YLGLPLGA  +S  +WD V ERFQ +LA  + +YLS
Sbjct: 75  CKVGSLPSCYLGLPLGAAFKSSRVWDVVEERFQKRLALWKRQYLS 119



 Score = 34.3 bits (77), Expect(2) = 1e-08
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +3

Query: 138 GRLVLIKSTLSSLPVYFCLFLSFP 209
           GRL L+KSTLSSLP+YF      P
Sbjct: 122 GRLTLVKSTLSSLPIYFMSLFIIP 145


>emb|CAN80153.1| hypothetical protein VITISV_037499 [Vitis vinifera]
          Length = 384

 Score = 44.7 bits (104), Expect(2) = 2e-08
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = +2

Query: 2   CQADSFPCTYLGLPLGADVRSKYIWDPVIERFQHKLAG*RCRYLS 136
           C    FP +YL LP GA  RS  +WD + ERF+ KL   + +YLS
Sbjct: 162 CNVGRFPTSYLHLPFGAPHRSIGVWDVIEERFKRKLVAWKKQYLS 206



 Score = 38.5 bits (88), Expect(2) = 2e-08
 Identities = 20/29 (68%), Positives = 23/29 (79%), Gaps = 1/29 (3%)
 Frame = +3

Query: 129 ISRG-RLVLIKSTLSSLPVYFCLFLSFPK 212
           +S+G RLVLIKSTLSSLP+YF  F   PK
Sbjct: 205 LSKGDRLVLIKSTLSSLPIYFMPFFVIPK 233


>emb|CAN72557.1| hypothetical protein VITISV_013403 [Vitis vinifera]
          Length = 1557

 Score = 47.8 bits (112), Expect(2) = 3e-08
 Identities = 21/45 (46%), Positives = 30/45 (66%)
 Frame = +2

Query: 2    CQADSFPCTYLGLPLGADVRSKYIWDPVIERFQHKLAG*RCRYLS 136
            C+    P  YLGLPLGA  +S+ +WD V ERF+ +LA  + +Y+S
Sbjct: 1293 CKVGGLPSCYLGLPLGAPFKSEVVWDSVEERFRKRLAMWKRQYIS 1337



 Score = 34.7 bits (78), Expect(2) = 3e-08
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = +3

Query: 138  GRLVLIKSTLSSLPVYFCLFLSFPK 212
            GRL LI+STLSSLPVYF      P+
Sbjct: 1340 GRLTLIRSTLSSLPVYFMSLFYLPR 1364


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