BLASTX nr result
ID: Coptis24_contig00037701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00037701
(401 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004156664.1| PREDICTED: LOW QUALITY PROTEIN: putative rec... 68 9e-24
ref|XP_004137908.1| PREDICTED: LOW QUALITY PROTEIN: putative rec... 68 9e-24
ref|XP_002322110.1| predicted protein [Populus trichocarpa] gi|2... 67 1e-22
ref|XP_002526877.1| serine-threonine protein kinase, plant-type,... 69 2e-22
ref|XP_003530273.1| PREDICTED: probable LRR receptor-like serine... 67 3e-22
>ref|XP_004156664.1| PREDICTED: LOW QUALITY PROTEIN: putative receptor-like protein
kinase At3g47110-like [Cucumis sativus]
Length = 1343
Score = 68.2 bits (165), Expect(2) = 9e-24
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +2
Query: 218 LPMSFTNASKLQVLDLPGNNFTGQVPTNLGAMQNIFRLNFGHNNLGRRETHDLSFITSLT 397
+P S N S LQ+LD P NNF G VP ++G ++ + RLNFG N+LG + DL+FI+SL
Sbjct: 275 IPKSLANISSLQILDFPNNNFFGMVPDDIGRLKYLERLNFGSNSLGSGKVGDLNFISSLV 334
Query: 398 N 400
N
Sbjct: 335 N 335
Score = 67.0 bits (162), Expect(2) = 9e-24
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = +3
Query: 24 SSLTAFLVGSNRLSGEVPPSIYNISSMNLFAIYSNQFTGTLPPDIGTSLPNLLSLAAGGN 203
S + F V N L+G VPPSIYNISS+ L N GTLPP+IG +LPNL S A G N
Sbjct: 210 SKMEFFTVVENNLTGIVPPSIYNISSLTLLQFTKNHLQGTLPPNIGFTLPNLQSFAGGIN 269
Query: 204 QLSG 215
G
Sbjct: 270 NFDG 273
Score = 45.1 bits (105), Expect(2) = 3e-08
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 27 SLTAFLVGSNRLSGEVPPSIYNISSMNL-FAIYSNQFTGTLPPDIGTSLPNLLSLAAGGN 203
SL + + SN LSG +P I++++S+++ + N FTG+LP +G L +LL L N
Sbjct: 460 SLVSLELSSNNLSGTIPKEIFSLTSLSITLTLDHNSFTGSLPDGVG-GLLSLLQLDLSEN 518
Query: 204 QLSG 215
+LSG
Sbjct: 519 KLSG 522
Score = 37.4 bits (85), Expect(2) = 3e-08
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 215 SLPMSFTNASKLQVLDLPGNNFTGQVPTNLGAMQNIFRLNFGHNNL 352
++P + + ++ L L GN F G +P + ++++ +LN HNNL
Sbjct: 523 NIPSNLGKCTSMEQLYLGGNQFEGTIPQSFKTLKSLVKLNLSHNNL 568
Score = 42.0 bits (97), Expect(2) = 2e-07
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 24 SSLTAFLVGSNRLSGEVPPSIYNISSMNLFAIYSNQFTG-TLPPDIGTSLPNLLSLAAGG 200
+ L A +G N LSG +P I N+ ++ + A+ N G ++PP+IG +L +L+ L G
Sbjct: 362 NQLVAITLGDNMLSGSIPLGITNLINLQVLAMEGNMMNGSSIPPNIG-NLKSLVLLYLGR 420
Query: 201 NQLSG 215
N L G
Sbjct: 421 NGLIG 425
Score = 37.7 bits (86), Expect(2) = 2e-07
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 194 GRKSTFRSLPMSFTNASKLQVLDLPGNNFTGQVPTNLGAMQNIFRLNFGHNNLGRRETHD 373
GR +P S N + L L L N G +PT+LG +++ L NNL +
Sbjct: 419 GRNGLIGPIPSSIGNLTSLTNLYLSYNKHDGYIPTSLGECKSLVSLELSSNNLSGTIPKE 478
Query: 374 LSFITSLT 397
+ +TSL+
Sbjct: 479 IFSLTSLS 486
>ref|XP_004137908.1| PREDICTED: LOW QUALITY PROTEIN: putative receptor-like protein
kinase At3g47110-like [Cucumis sativus]
Length = 1343
Score = 68.2 bits (165), Expect(2) = 9e-24
Identities = 31/61 (50%), Positives = 42/61 (68%)
Frame = +2
Query: 218 LPMSFTNASKLQVLDLPGNNFTGQVPTNLGAMQNIFRLNFGHNNLGRRETHDLSFITSLT 397
+P S N S LQ+LD P NNF G VP ++G ++ + RLNFG N+LG + DL+FI+SL
Sbjct: 275 IPKSLANISSLQILDFPNNNFFGMVPDDIGRLKYLERLNFGSNSLGSGKVGDLNFISSLV 334
Query: 398 N 400
N
Sbjct: 335 N 335
Score = 67.0 bits (162), Expect(2) = 9e-24
Identities = 34/64 (53%), Positives = 39/64 (60%)
Frame = +3
Query: 24 SSLTAFLVGSNRLSGEVPPSIYNISSMNLFAIYSNQFTGTLPPDIGTSLPNLLSLAAGGN 203
S + F V N L+G VPPSIYNISS+ L N GTLPP+IG +LPNL S A G N
Sbjct: 210 SKMEFFTVVENNLTGIVPPSIYNISSLTLLQFTKNHLQGTLPPNIGFTLPNLQSFAGGIN 269
Query: 204 QLSG 215
G
Sbjct: 270 NFDG 273
Score = 45.1 bits (105), Expect(2) = 3e-08
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +3
Query: 27 SLTAFLVGSNRLSGEVPPSIYNISSMNL-FAIYSNQFTGTLPPDIGTSLPNLLSLAAGGN 203
SL + + SN LSG +P I++++S+++ + N FTG+LP +G L +LL L N
Sbjct: 460 SLVSLELSSNNLSGTIPKEIFSLTSLSITLTLDHNSFTGSLPDGVG-GLLSLLQLDLSEN 518
Query: 204 QLSG 215
+LSG
Sbjct: 519 KLSG 522
Score = 37.4 bits (85), Expect(2) = 3e-08
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 215 SLPMSFTNASKLQVLDLPGNNFTGQVPTNLGAMQNIFRLNFGHNNL 352
++P + + ++ L L GN F G +P + ++++ +LN HNNL
Sbjct: 523 NIPSNLGKCTSMEQLYLGGNQFEGTIPQSFKTLKSLVKLNLSHNNL 568
Score = 42.0 bits (97), Expect(2) = 2e-07
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +3
Query: 24 SSLTAFLVGSNRLSGEVPPSIYNISSMNLFAIYSNQFTG-TLPPDIGTSLPNLLSLAAGG 200
+ L A +G N LSG +P I N+ ++ + A+ N G ++PP+IG +L +L+ L G
Sbjct: 362 NQLVAITLGDNMLSGSIPLGITNLINLQVLAMEGNMMNGSSIPPNIG-NLKSLVLLYLGR 420
Query: 201 NQLSG 215
N L G
Sbjct: 421 NGLIG 425
Score = 37.7 bits (86), Expect(2) = 2e-07
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +2
Query: 194 GRKSTFRSLPMSFTNASKLQVLDLPGNNFTGQVPTNLGAMQNIFRLNFGHNNLGRRETHD 373
GR +P S N + L L L N G +PT+LG +++ L NNL +
Sbjct: 419 GRNGLIGPIPSSIGNLTSLTNLYLSYNKHDGYIPTSLGECKSLVSLELSSNNLSGTIPKE 478
Query: 374 LSFITSLT 397
+ +TSL+
Sbjct: 479 IFSLTSLS 486
>ref|XP_002322110.1| predicted protein [Populus trichocarpa] gi|222869106|gb|EEF06237.1|
predicted protein [Populus trichocarpa]
Length = 1023
Score = 67.0 bits (162), Expect(2) = 1e-22
Identities = 34/69 (49%), Positives = 42/69 (60%)
Frame = +2
Query: 194 GRKSTFRSLPMSFTNASKLQVLDLPGNNFTGQVPTNLGAMQNIFRLNFGHNNLGRRETHD 373
G F +P S N S L +DL N+ TG VP NLG +QN+ +NFG N LG T D
Sbjct: 280 GTNQFFGHIPKSIVNFSSLIDIDLAYNSLTGPVPNNLGNLQNLETINFGGNPLGDENTSD 339
Query: 374 LSFITSLTN 400
L+F+TSLTN
Sbjct: 340 LTFLTSLTN 348
Score = 64.3 bits (155), Expect(2) = 1e-22
Identities = 32/64 (50%), Positives = 41/64 (64%)
Frame = +3
Query: 24 SSLTAFLVGSNRLSGEVPPSIYNISSMNLFAIYSNQFTGTLPPDIGTSLPNLLSLAAGGN 203
S+L + SN+LSG VP +YNISS+NL + NQ TG LP DIG +LP + +L G N
Sbjct: 223 SALEVLSLYSNKLSGMVPEQLYNISSINLLTVADNQLTGRLPHDIGLTLPKMQTLYLGTN 282
Query: 204 QLSG 215
Q G
Sbjct: 283 QFFG 286
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3
Query: 45 VGSNRLSGEVPPSIYNISSMNLFAIYSNQFTGTLPPDIGTSLPNLLSLAAGGNQLSG 215
+G+N ++G++P I N+ ++ A + N TG LP IG L L L N++SG
Sbjct: 382 LGTNYITGDIPVEIENLKNLEYLAFHGNMLTGRLPDSIG-KLSKLQELHIYTNKISG 437
Score = 39.7 bits (91), Expect(2) = 2e-07
Identities = 18/46 (39%), Positives = 29/46 (63%)
Frame = +2
Query: 215 SLPMSFTNASKLQVLDLPGNNFTGQVPTNLGAMQNIFRLNFGHNNL 352
++P+S N S+L+VLDL N+ +G +P L + ++F L NNL
Sbjct: 462 TIPVSLANYSQLEVLDLSYNHLSGVIPEKLAGIDSLFGLFLALNNL 507
>ref|XP_002526877.1| serine-threonine protein kinase, plant-type, putative [Ricinus
communis] gi|223533776|gb|EEF35508.1| serine-threonine
protein kinase, plant-type, putative [Ricinus communis]
Length = 721
Score = 69.3 bits (168), Expect(2) = 2e-22
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +2
Query: 215 SLPMSFTNASKLQVLDLPGNNFTGQVPTNLGAMQNIFRLNFGHNNLGRRETHDLSFITSL 394
S+P+SFTNAS+L+ LD+ GN FTG VP NLG +Q + LN N LGR + DLSFI SL
Sbjct: 268 SIPISFTNASQLKRLDISGNIFTGGVPINLGNLQALQWLNLEFNLLGRNTSKDLSFIKSL 327
Query: 395 TN 400
+N
Sbjct: 328 SN 329
Score = 61.6 bits (148), Expect(2) = 2e-22
Identities = 29/63 (46%), Positives = 41/63 (65%)
Frame = +3
Query: 27 SLTAFLVGSNRLSGEVPPSIYNISSMNLFAIYSNQFTGTLPPDIGTSLPNLLSLAAGGNQ 206
SL F +G+N L+G +P ++YNISS+ F+ +NQ G+LP +IG +LPNL G NQ
Sbjct: 205 SLRFFGIGANYLTGTIPATLYNISSIIAFSAPANQLNGSLPANIGNTLPNLQRFGIGANQ 264
Query: 207 LSG 215
G
Sbjct: 265 FHG 267
>ref|XP_003530273.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At3g47570-like [Glycine max]
Length = 1001
Score = 67.0 bits (162), Expect(2) = 3e-22
Identities = 32/62 (51%), Positives = 41/62 (66%)
Frame = +2
Query: 215 SLPMSFTNASKLQVLDLPGNNFTGQVPTNLGAMQNIFRLNFGHNNLGRRETHDLSFITSL 394
S+P S NASKL++LD N TG +P NLG + + RL+F HN LG +T DLSF+ SL
Sbjct: 245 SVPASLLNASKLEILDFSLNGLTGTLPKNLGVLYRLTRLSFEHNRLGTGKTDDLSFLDSL 304
Query: 395 TN 400
N
Sbjct: 305 VN 306
Score = 63.2 bits (152), Expect(2) = 3e-22
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = +3
Query: 24 SSLTAFLVGSNRLSGEVPPSIYNISSMNLFAIYSNQFTGTLPPDIGTSLPNLLSLAAGGN 203
SSLT+ ++ N L+G VP SIYNISS+ F N GTLP D+G +LPN+ A N
Sbjct: 181 SSLTSLVLYGNYLTGTVPSSIYNISSLYYFTFTQNHLHGTLPADVGFTLPNIQVFAGAVN 240
Query: 204 QLSGLFQCRLL 236
L+G LL
Sbjct: 241 NLTGSVPASLL 251