BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037698
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523554.1| pentatricopeptide repeat-containing protein,...   139   2e-31
ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containi...   128   6e-28
emb|CBI21441.3| unnamed protein product [Vitis vinifera]              128   6e-28
ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
emb|CAN74807.1| hypothetical protein VITISV_022137 [Vitis vinifera]   116   2e-24

>ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537116|gb|EEF38749.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 611

 Score =  139 bits (351), Expect = 2e-31
 Identities = 66/97 (68%), Positives = 78/97 (80%)
 Frame = -2

Query: 292 NGPAALQLLHEMYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTVGHY 113
           +G AAL+LL EM  SGI PNS TFTS LSAC+HSGLV EG +LF S+T++Y +TP + HY
Sbjct: 445 HGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRMEHY 504

Query: 112 SCVVDLLGRAGWFVDAVNFIDKMPINPDKSIWGALLA 2
           SC+VD+L RAG F DAV FI KMP+ PDKSIWGALLA
Sbjct: 505 SCIVDMLARAGQFADAVTFIHKMPLEPDKSIWGALLA 541


>ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Vitis vinifera]
          Length = 634

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/96 (63%), Positives = 76/96 (79%)
 Frame = -2

Query: 289 GPAALQLLHEMYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTVGHYS 110
           G  ALQLL +M HS + PNSVTFTSALSAC+HSGLV EG++LF+++T+++G TP + H+S
Sbjct: 473 GQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFS 532

Query: 109 CVVDLLGRAGWFVDAVNFIDKMPINPDKSIWGALLA 2
           CVVDLL RA    DAV FI+KMP+ P K IW ALLA
Sbjct: 533 CVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLA 568


>emb|CBI21441.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/96 (63%), Positives = 76/96 (79%)
 Frame = -2

Query: 289 GPAALQLLHEMYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTVGHYS 110
           G  ALQLL +M HS + PNSVTFTSALSAC+HSGLV EG++LF+++T+++G TP + H+S
Sbjct: 671 GQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFS 730

Query: 109 CVVDLLGRAGWFVDAVNFIDKMPINPDKSIWGALLA 2
           CVVDLL RA    DAV FI+KMP+ P K IW ALLA
Sbjct: 731 CVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLA 766


>ref|XP_002274803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18970
           [Vitis vinifera] gi|298204853|emb|CBI34160.3| unnamed
           protein product [Vitis vinifera]
          Length = 471

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/96 (54%), Positives = 71/96 (73%)
 Frame = -2

Query: 289 GPAALQLLHEMYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTVGHYS 110
           G  AL+LL EM   G++PN+VTFTS  SAC H+GLV EG+QLF+S+  ++GVTP + HY 
Sbjct: 298 GKEALELLDEMVAYGVKPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFGVTPGIQHYG 357

Query: 109 CVVDLLGRAGWFVDAVNFIDKMPINPDKSIWGALLA 2
           C+VDLLGRAG   +A +F+  MP+ PD  +W +LL+
Sbjct: 358 CIVDLLGRAGHLKEAYDFVRGMPVEPDAILWRSLLS 393


>emb|CAN74807.1| hypothetical protein VITISV_022137 [Vitis vinifera]
          Length = 437

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/96 (54%), Positives = 71/96 (73%)
 Frame = -2

Query: 289 GPAALQLLHEMYHSGIQPNSVTFTSALSACAHSGLVTEGIQLFNSLTQEYGVTPTVGHYS 110
           G  AL+LL EM   G++PN+VTFTS  SAC H+GLV EG+QLF+S+  ++GVTP + HY 
Sbjct: 264 GKEALELLDEMVAYGVKPNAVTFTSLFSACCHAGLVEEGLQLFHSMRSKFGVTPGIQHYG 323

Query: 109 CVVDLLGRAGWFVDAVNFIDKMPINPDKSIWGALLA 2
           C+VDLLGRAG   +A +F+  MP+ PD  +W +LL+
Sbjct: 324 CIVDLLGRAGHLKEAYDFVRGMPVEPDAILWRSLLS 359