BLASTX nr result

ID: Coptis24_contig00037691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037691
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638650.1| Multidrug resistance protein ABC transporter...   213   2e-53
ref|XP_002527423.1| multidrug resistance-associated protein 1, 3...   211   4e-53
ref|XP_003620472.1| Multidrug resistance protein ABC transporter...   210   1e-52
ref|XP_003627965.1| ABC transporter C family member [Medicago tr...   206   2e-51
ref|XP_003627931.1| Multidrug resistance protein ABC transporter...   202   2e-50

>ref|XP_003638650.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355504585|gb|AES85788.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1549

 Score =  213 bits (541), Expect = 2e-53
 Identities = 102/160 (63%), Positives = 122/160 (76%)
 Frame = +2

Query: 2   EFPFWFHSTWTCALQXXXXXXXXXXXXXXXXXXXXXXXXICGILNIPFAKALQNSQSQFM 181
           EFP+WFH+TWTCA Q                        ICG+LN+PFA+ LQN QSQFM
Sbjct: 391 EFPWWFHTTWTCAFQLILSISVLFGVVGVGALPGLVPLLICGLLNVPFARILQNCQSQFM 450

Query: 182 VAQDERLRSTSEVLNNMKVIKLHSWEKKFKNYIESLRDIEFKWLSKSQIVKSYGTGLYWM 361
           +AQDERLRSTSEVLN+MK+IKL SWE+KFKN +E LRD EF WLSK+QI+K+  + LYWM
Sbjct: 451 IAQDERLRSTSEVLNSMKIIKLQSWEEKFKNLVELLRDKEFVWLSKAQILKATNSFLYWM 510

Query: 362 SPTLVSSIVFLGCAVTKSAPLNPTTIFTVLATLRSMSEPL 481
           SPT+VS++VF+GCAVTKSAPLN  TIFTVLATLR+M EP+
Sbjct: 511 SPTVVSAVVFVGCAVTKSAPLNAETIFTVLATLRNMGEPV 550


>ref|XP_002527423.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223533233|gb|EEF34989.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1475

 Score =  211 bits (538), Expect = 4e-53
 Identities = 99/160 (61%), Positives = 124/160 (77%)
 Frame = +2

Query: 2   EFPFWFHSTWTCALQXXXXXXXXXXXXXXXXXXXXXXXXICGILNIPFAKALQNSQSQFM 181
           EFP+WFH+TW   LQ                        ICG+LN+PFA+ LQ  QS+FM
Sbjct: 401 EFPWWFHATWAYVLQLFLSIIILFGVVGLGAVTGLVPLLICGLLNVPFARFLQKCQSKFM 460

Query: 182 VAQDERLRSTSEVLNNMKVIKLHSWEKKFKNYIESLRDIEFKWLSKSQIVKSYGTGLYWM 361
           +AQDERLR+TSE+LNNMK+IKL SWE+KFK+YIESLRD EFKWL++SQI K+YGT LYW+
Sbjct: 461 IAQDERLRATSEILNNMKIIKLQSWEEKFKSYIESLRDTEFKWLTESQIKKTYGTILYWL 520

Query: 362 SPTLVSSIVFLGCAVTKSAPLNPTTIFTVLATLRSMSEPL 481
           SPT++SS+VF+GCA+ +SAPLN +TIFTVLATLRSM+EP+
Sbjct: 521 SPTIISSVVFVGCALFRSAPLNSSTIFTVLATLRSMAEPV 560


>ref|XP_003620472.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355495487|gb|AES76690.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1447

 Score =  210 bits (534), Expect = 1e-52
 Identities = 99/160 (61%), Positives = 121/160 (75%)
 Frame = +2

Query: 2   EFPFWFHSTWTCALQXXXXXXXXXXXXXXXXXXXXXXXXICGILNIPFAKALQNSQSQFM 181
           EFP+WFH TWTC LQ                        ICG+LN+PFA+ LQN QSQFM
Sbjct: 398 EFPWWFHITWTCILQLVLSIAVLFGVVGIGALPGLVPLVICGLLNVPFARILQNCQSQFM 457

Query: 182 VAQDERLRSTSEVLNNMKVIKLHSWEKKFKNYIESLRDIEFKWLSKSQIVKSYGTGLYWM 361
           +AQDERLRSTSE+LN+MK+IKL SWE+KFKN +ESLRD EF WLSKSQI+K+  + L+WM
Sbjct: 458 IAQDERLRSTSEILNSMKIIKLQSWEEKFKNLVESLRDKEFVWLSKSQILKASSSFLFWM 517

Query: 362 SPTLVSSIVFLGCAVTKSAPLNPTTIFTVLATLRSMSEPL 481
           SPT++SS+VFLGCA++ SAPLN  TIFTVLATL+SM +P+
Sbjct: 518 SPTIISSVVFLGCAISNSAPLNAQTIFTVLATLKSMGDPV 557


>ref|XP_003627965.1| ABC transporter C family member [Medicago truncatula]
           gi|355521987|gb|AET02441.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1463

 Score =  206 bits (523), Expect = 2e-51
 Identities = 99/160 (61%), Positives = 120/160 (75%)
 Frame = +2

Query: 2   EFPFWFHSTWTCALQXXXXXXXXXXXXXXXXXXXXXXXXICGILNIPFAKALQNSQSQFM 181
           EFP+WFH TWT ALQ                        ICG+ NIPFA+ LQN QSQFM
Sbjct: 394 EFPWWFHITWTSALQLFLSTSVLFIVVGIGALPGLVPLLICGLFNIPFARILQNCQSQFM 453

Query: 182 VAQDERLRSTSEVLNNMKVIKLHSWEKKFKNYIESLRDIEFKWLSKSQIVKSYGTGLYWM 361
           +AQDERLR+TSE+LN+MK+IKL SWE+KFKN +ESLRD EF WLSK+QI+K+ G+ LYW+
Sbjct: 454 IAQDERLRTTSEILNSMKIIKLQSWEEKFKNLVESLRDKEFVWLSKAQILKASGSFLYWI 513

Query: 362 SPTLVSSIVFLGCAVTKSAPLNPTTIFTVLATLRSMSEPL 481
           SP +VS++VFL C+VTKSAPLN  TIFTVLATLR+M EP+
Sbjct: 514 SPAMVSAVVFLACSVTKSAPLNAETIFTVLATLRNMGEPV 553


>ref|XP_003627931.1| Multidrug resistance protein ABC transporter family [Medicago
           truncatula] gi|355521953|gb|AET02407.1| Multidrug
           resistance protein ABC transporter family [Medicago
           truncatula]
          Length = 1306

 Score =  202 bits (514), Expect = 2e-50
 Identities = 96/160 (60%), Positives = 118/160 (73%)
 Frame = +2

Query: 2   EFPFWFHSTWTCALQXXXXXXXXXXXXXXXXXXXXXXXXICGILNIPFAKALQNSQSQFM 181
           EFP+WFH  WT  LQ                        ICG+LN+P  + LQN +SQFM
Sbjct: 204 EFPWWFHMAWTSVLQLVLSIGVLFFVVGIGALPGLVPLLICGLLNVPLGRVLQNCRSQFM 263

Query: 182 VAQDERLRSTSEVLNNMKVIKLHSWEKKFKNYIESLRDIEFKWLSKSQIVKSYGTGLYWM 361
           +AQDERLRSTSE+LN+MK+IKL SWE+KFKN +ESLR+ EF WLSK+QI+KSY + L+WM
Sbjct: 264 IAQDERLRSTSEILNSMKIIKLQSWEEKFKNLVESLRNKEFIWLSKTQILKSYSSFLFWM 323

Query: 362 SPTLVSSIVFLGCAVTKSAPLNPTTIFTVLATLRSMSEPL 481
           SPT++S++VFLGCAVTKSAPLN  TIFTVLATL +M EP+
Sbjct: 324 SPTVISAVVFLGCAVTKSAPLNAETIFTVLATLGNMGEPI 363