BLASTX nr result
ID: Coptis24_contig00037686
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00037686
(450 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004172720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 72 7e-26
ref|XP_004144675.1| PREDICTED: uncharacterized protein L728-like... 72 7e-26
ref|XP_002515917.1| conserved hypothetical protein [Ricinus comm... 72 8e-26
ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|2... 73 1e-25
ref|XP_002262895.2| PREDICTED: uncharacterized protein L728-like... 75 1e-24
>ref|XP_004172720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein L728-like
[Cucumis sativus]
Length = 638
Score = 71.6 bits (174), Expect(2) = 7e-26
Identities = 33/49 (67%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -2
Query: 149 CLVSDMKNFNSGS-GGISLASKWCPSLDSTFDKTTLLCESIARRVFPRE 6
CL SD++ NSG ISLA+KWCPS+DS+FD++TLLCESIAR++FPRE
Sbjct: 259 CLKSDLQFMNSGDFTKISLAAKWCPSIDSSFDRSTLLCESIARKIFPRE 307
Score = 70.5 bits (171), Expect(2) = 7e-26
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 10/112 (8%)
Frame = -1
Query: 450 FGYFKDLVQILYQVLGGPDNFRQKRKGWQAAECRKANAKIQRE----------SGVPREK 301
FGYFKDL +ILY++L G D + ++ W+ + + ++E S RE
Sbjct: 145 FGYFKDLPEILYRLLEGSDVRKNQKNEWKRRGLSVRHGRFKQEKPKTRKKEIQSSTDREA 204
Query: 300 RIALEMKRMQIQEELAREIRKAKGITQARKTVEKYISDAEFRFLHDQISQVF 145
I+ M++ +I++E A RK + ++ ARK +E++ +D+ F+ LHD+IS F
Sbjct: 205 NISKAMEKSRIEKEKASGERKLRKVSMARKVMERFQADSNFQLLHDRISDFF 256
>ref|XP_004144675.1| PREDICTED: uncharacterized protein L728-like [Cucumis sativus]
Length = 638
Score = 71.6 bits (174), Expect(2) = 7e-26
Identities = 33/49 (67%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = -2
Query: 149 CLVSDMKNFNSGS-GGISLASKWCPSLDSTFDKTTLLCESIARRVFPRE 6
CL SD++ NSG ISLA+KWCPS+DS+FD++TLLCESIAR++FPRE
Sbjct: 259 CLKSDLQFMNSGDFTKISLAAKWCPSIDSSFDRSTLLCESIARKIFPRE 307
Score = 70.5 bits (171), Expect(2) = 7e-26
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 10/112 (8%)
Frame = -1
Query: 450 FGYFKDLVQILYQVLGGPDNFRQKRKGWQAAECRKANAKIQRE----------SGVPREK 301
FGYFKDL +ILY++L G D + ++ W+ + + ++E S RE
Sbjct: 145 FGYFKDLPEILYRLLEGSDVRKNQKNEWKRRGLSVRHGRFKQEKPKTRKKEIQSSTDREA 204
Query: 300 RIALEMKRMQIQEELAREIRKAKGITQARKTVEKYISDAEFRFLHDQISQVF 145
I+ M++ +I++E A RK + ++ ARK +E++ +D+ F+ LHD+IS F
Sbjct: 205 NISKAMEKSRIEKEKASGERKLRKVSMARKVMERFQADSNFQLLHDRISDFF 256
>ref|XP_002515917.1| conserved hypothetical protein [Ricinus communis]
gi|223544822|gb|EEF46337.1| conserved hypothetical
protein [Ricinus communis]
Length = 419
Score = 72.0 bits (175), Expect(2) = 8e-26
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 17/119 (14%)
Frame = -1
Query: 450 FGYFKDLVQILYQVLGGPDNFRQKRKGWQAAECRKANAKIQRES---------------- 319
FGYFKDL +ILY++L G D + ++ W+ + + +I
Sbjct: 149 FGYFKDLPEILYRLLEGYDVRKNQKLEWEMRKSGGSGKRINHRRPTFRGPFQEVRSKKVK 208
Query: 318 -GVPREKRIALEMKRMQIQEELAREIRKAKGITQARKTVEKYISDAEFRFLHDQISQVF 145
V RE RIA +KR I++E A ++RK K + A+K EKY D +FRFL+++IS F
Sbjct: 209 LSVTRELRIANAIKRNAIEKEKASKLRKEKKVAMAKKIYEKYNQDPDFRFLYERISHFF 267
Score = 70.1 bits (170), Expect(2) = 8e-26
Identities = 32/50 (64%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
Frame = -2
Query: 149 CLVSDMKNFNSGS-GGISLASKWCPSLDSTFDKTTLLCESIARRVFPRES 3
CL +D+++ +G ISLA+KWCPSL+S+FD++TLLCESIAR+VFPRES
Sbjct: 270 CLKADLEHLKAGEMKNISLAAKWCPSLNSSFDRSTLLCESIARKVFPRES 319
>ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|222842087|gb|EEE79634.1|
predicted protein [Populus trichocarpa]
Length = 651
Score = 72.8 bits (177), Expect(2) = 1e-25
Identities = 33/50 (66%), Positives = 44/50 (88%), Gaps = 1/50 (2%)
Frame = -2
Query: 149 CLVSDMKNFNSGSGG-ISLASKWCPSLDSTFDKTTLLCESIARRVFPRES 3
CL +DM++ NS + +SLA+KWCPS+DS+FD++TLLCESIAR+VFPRES
Sbjct: 274 CLKTDMQHLNSSNTTKVSLAAKWCPSIDSSFDRSTLLCESIARKVFPRES 323
Score = 68.6 bits (166), Expect(2) = 1e-25
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 26/128 (20%)
Frame = -1
Query: 450 FGYFKDLVQILYQVLGGPDNFRQKRKGWQAAECRKA------------------------ 343
FGYFKDL +ILY++L GPD + +++ W+ + RK
Sbjct: 144 FGYFKDLPEILYRLLEGPDVRKIQKQEWRQRKGRKTGRRAGFKIGQPKTLAPFQRSKRPK 203
Query: 342 NAKIQRESG--VPREKRIALEMKRMQIQEELAREIRKAKGITQARKTVEKYISDAEFRFL 169
NAK R +G +P RI E +R ++++E A RK + A+K +E+Y D ++RFL
Sbjct: 204 NAKSSRNAGPSIPIHIRIQNEKRRAEMEKENASIARKERRAAMAKKVIERYSHDPDYRFL 263
Query: 168 HDQISQVF 145
++ +S F
Sbjct: 264 YEGVSDFF 271
>ref|XP_002262895.2| PREDICTED: uncharacterized protein L728-like isoform 1 [Vitis
vinifera]
Length = 647
Score = 74.7 bits (182), Expect(2) = 1e-24
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 17/119 (14%)
Frame = -1
Query: 450 FGYFKDLVQILYQVLGGPDNFRQKRKGWQAAECRKANAKIQR-----------------E 322
FGY+KDL++IL+++L GPD R + + ++ N +++ +
Sbjct: 150 FGYYKDLLEILFRLLEGPDVRRIAKSQRRMKNKKRGNYFVRKFIFGHGKLGKNKKTKKGK 209
Query: 321 SGVPREKRIALEMKRMQIQEELAREIRKAKGITQARKTVEKYISDAEFRFLHDQISQVF 145
+PRE R+ EM+R + ++E AR RK + + A+K VE+Y D ++RFLHD+IS +F
Sbjct: 210 HVLPREVRVKAEMERAKAEKETARVCRKERRLAMAKKAVERYGRDPDYRFLHDRISDLF 268
Score = 63.5 bits (153), Expect(2) = 1e-24
Identities = 29/47 (61%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
Frame = -2
Query: 146 LVSDMKNFNSGS-GGISLASKWCPSLDSTFDKTTLLCESIARRVFPR 9
L SD++ NSG+ ISLA+KWCPS+DS+FD++TLLC SIAR++FP+
Sbjct: 272 LKSDLQLLNSGNVNKISLAAKWCPSIDSSFDRSTLLCGSIARKIFPK 318