BLASTX nr result

ID: Coptis24_contig00037681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037681
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30183.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002298164.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_003590439.1| hypothetical protein MTR_1g062160 [Medicago ...    90   2e-16
ref|XP_003535238.1| PREDICTED: uncharacterized protein LOC100809...    88   6e-16

>emb|CBI30183.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/78 (64%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
 Frame = +1

Query: 1   LGCKLVRIKRKGDATFIFGSNNEVTMDRGEGMSRK-ISKEEEQLREGTQHQIYPSTHSPP 177
           LGCKLV IKR GDA+F   + NE+ M+RGEG+SR+  S++E++LREG Q  IYP T  PP
Sbjct: 127 LGCKLVGIKRNGDASFSLEAKNEMAMERGEGISRRESSRDEDELREGLQQDIYPPTPPPP 186

Query: 178 PNS-RRRKGIPHRAPFGS 228
           P+S RRRKGIPHRAPF S
Sbjct: 187 PSSARRRKGIPHRAPFAS 204


>ref|XP_002298164.1| predicted protein [Populus trichocarpa] gi|222845422|gb|EEE82969.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
 Frame = +1

Query: 1   LGCKLVRIKRKGDATFIFGSNNEVTMDRGEGMSRKI-SKEEEQLREGTQHQIYPSTHSPP 177
           LGCKLVRIK  GDATF   + +E   +  EGM R++ SKEEE+LREG+Q  +Y ST +PP
Sbjct: 132 LGCKLVRIKNNGDATFNLSTKDEEVGEMREGMGRRLPSKEEEELREGSQQDMYTSTLTPP 191

Query: 178 -PNSRRRKGIPHRAPFGS 228
             NSRRRKGIPHRAPFGS
Sbjct: 192 HSNSRRRKGIPHRAPFGS 209


>ref|XP_002326397.1| predicted protein [Populus trichocarpa] gi|222833590|gb|EEE72067.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/77 (63%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1   LGCKLVRIKRKGDATFIFGSNNEVTMDRGEGMSRKISKEEEQLREGTQHQIYPSTHSPPP 180
           LGCKL  +KR GDA+F   + NE  M R EG    IS EEE LREG+Q  IYP T  PPP
Sbjct: 130 LGCKLEGVKRNGDASFTLEAKNEALMGRREG----ISGEEEDLREGSQQDIYPPTPPPPP 185

Query: 181 NS-RRRKGIPHRAPFGS 228
           +S RRRKGIPHRAPFGS
Sbjct: 186 SSARRRKGIPHRAPFGS 202


>ref|XP_003590439.1| hypothetical protein MTR_1g062160 [Medicago truncatula]
           gi|355479487|gb|AES60690.1| hypothetical protein
           MTR_1g062160 [Medicago truncatula]
          Length = 203

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
 Frame = +1

Query: 1   LGCKLVRIKRKGDATFIFGSNNEVTMDRGEGMSRKISKEEEQLREGTQHQIYPST-HSPP 177
           LGCKLV IKR G+A+F+  +NN       EGMSR   ++EE+LREG+Q  +YP+T  +PP
Sbjct: 130 LGCKLVGIKRNGNASFVLDANNNEVSTMEEGMSR---QQEEELREGSQQGMYPATPPTPP 186

Query: 178 PNSRRRKGIPHRAPFG 225
            N+RRRKGIPHRAPFG
Sbjct: 187 SNARRRKGIPHRAPFG 202


>ref|XP_003535238.1| PREDICTED: uncharacterized protein LOC100809455 [Glycine max]
          Length = 208

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/81 (59%), Positives = 58/81 (71%), Gaps = 5/81 (6%)
 Frame = +1

Query: 1   LGCKLVRIKRKGDATFIFGSNNEVTMDRGEGMSRKISK----EEEQLREGTQHQIYPSTH 168
           LGCKLV IKR GDA+F   + NE +    EGMSR+       +EE+LREG+Q  +YP+T 
Sbjct: 130 LGCKLVGIKRNGDASFTLDAKNEASTM--EGMSRRSVSSRHHQEEELREGSQQDMYPATP 187

Query: 169 SPPP-NSRRRKGIPHRAPFGS 228
           SPP  N+RRRKGIPHRAPFGS
Sbjct: 188 SPPASNARRRKGIPHRAPFGS 208


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