BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037643
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea m...    69   4e-10
ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [S...    65   6e-09
ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]    65   7e-09
ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containi...    61   8e-08

>tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/69 (50%), Positives = 44/69 (63%)
 Frame = -3

Query: 208 IEDSGCSPNSVIYMTLICSLGKDGHIFKASNFLKEMRACGLIPDALTYTVIIQGQCQLKR 29
           IE+    PNSVIYMTLI  L  DG   +A      MR  G+IPD+ TYT++I+GQC L  
Sbjct: 544 IEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGY 603

Query: 28  ILNATMWFA 2
           +LNA M +A
Sbjct: 604 VLNAMMLYA 612


>ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
           gi|241923581|gb|EER96725.1| hypothetical protein
           SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 32/68 (47%), Positives = 42/68 (61%)
 Frame = -3

Query: 205 EDSGCSPNSVIYMTLICSLGKDGHIFKASNFLKEMRACGLIPDALTYTVIIQGQCQLKRI 26
           E+    PNS IYMTLI  L  DG  ++A      MR  G+I D+ TYT++I+GQC L  +
Sbjct: 537 EEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYV 596

Query: 25  LNATMWFA 2
           LNA M +A
Sbjct: 597 LNAMMLYA 604


>ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = -3

Query: 220 ETNQIEDSGCSPNSVIYMTLICSLGKDGHIFKASNFLKEMRACGLIPDALTYTVIIQGQC 41
           +TN+++ S CSPN V+Y  LI  L  DG IFKAS F  +MR  GL PD  T  VIIQG  
Sbjct: 543 KTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHF 602

Query: 40  QLKRILNATM 11
           +   + +  M
Sbjct: 603 RAMHLRDVMM 612


>emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = -3

Query: 220 ETNQIEDSGCSPNSVIYMTLICSLGKDGHIFKASNFLKEMRACGLIPDALTYTVIIQGQC 41
           +TN+++ S CSPN V+Y  LI  L  DG IFKAS F  +MR  GL PD  T  VIIQG  
Sbjct: 543 KTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHF 602

Query: 40  QLKRILNATM 11
           +   + +  M
Sbjct: 603 RAMHLRDVMM 612


>ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Brachypodium distachyon]
          Length = 620

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = -3

Query: 217 TNQIEDSGCSP-NSVIYMTLICSLGKDGHIFKASNFLKEMRACGLIPDALTYTVIIQGQC 41
           +N   +  CS  NSV YMTLI  L  DG   +A  F   MR   ++PD+ TY+++I+GQC
Sbjct: 515 SNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQC 574

Query: 40  QLKRILNATMWFA 2
            L  +LNA M +A
Sbjct: 575 MLGYVLNAMMLYA 587