BLASTX nr result

ID: Coptis24_contig00037638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037638
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002461954.1| hypothetical protein SORBIDRAFT_02g011140 [S...    75   7e-12
ref|XP_002468514.1| hypothetical protein SORBIDRAFT_01g047190 [S...    75   7e-12
ref|XP_002438303.1| hypothetical protein SORBIDRAFT_10g011520 [S...    72   6e-11
tpg|DAA53680.1| TPA: hypothetical protein ZEAMMB73_746371 [Zea m...    67   2e-09
gb|AFW65003.1| hypothetical protein ZEAMMB73_751466 [Zea mays]         65   6e-09

>ref|XP_002461954.1| hypothetical protein SORBIDRAFT_02g011140 [Sorghum bicolor]
           gi|241925331|gb|EER98475.1| hypothetical protein
           SORBIDRAFT_02g011140 [Sorghum bicolor]
          Length = 759

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
 Frame = +2

Query: 17  MNSSGASANPIGGANS-----RKSDDPAWNYMFCPNSNNKNNVTCRLCLKNFSGGISRAK 181
           M+++G+ A P  GA       R SDD  W Y F  + NNK+ V C+ C K  SGGI R K
Sbjct: 1   MSTTGSDAAPTPGAEGVNLLKRNSDDVGWEYGFLVDPNNKDKVKCKFCNKEMSGGIYRLK 60

Query: 182 EHLLHKSGQVTACPKVTIEIMKRISEFVQCKTKKKSDK 295
           +H+ H     T CPK T E  ++  + ++   +K+++K
Sbjct: 61  QHVAHDGKNTTKCPKCTDEAKEKCQKSLEGAKRKRAEK 98


>ref|XP_002468514.1| hypothetical protein SORBIDRAFT_01g047190 [Sorghum bicolor]
           gi|241922368|gb|EER95512.1| hypothetical protein
           SORBIDRAFT_01g047190 [Sorghum bicolor]
          Length = 759

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
 Frame = +2

Query: 17  MNSSGASANPIGGANS-----RKSDDPAWNYMFCPNSNNKNNVTCRLCLKNFSGGISRAK 181
           M+++G+ A P  GA       R SDD  W Y F  + NNK+ V C+ C K  SGGI R K
Sbjct: 1   MSTTGSDAAPTPGAEGVNLLKRNSDDVGWEYGFLVDPNNKDKVKCKFCNKEMSGGIYRLK 60

Query: 182 EHLLHKSGQVTACPKVTIEIMKRISEFVQCKTKKKSDK 295
           +H+ H     T CPK T E  ++  + ++   +K+++K
Sbjct: 61  QHVAHDGKNTTKCPKCTDEAKEKCQKSLEGAKRKRAEK 98


>ref|XP_002438303.1| hypothetical protein SORBIDRAFT_10g011520 [Sorghum bicolor]
           gi|241916526|gb|EER89670.1| hypothetical protein
           SORBIDRAFT_10g011520 [Sorghum bicolor]
          Length = 759

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
 Frame = +2

Query: 17  MNSSGASANPIGGANS-----RKSDDPAWNYMFCPNSNNKNNVTCRLCLKNFSGGISRAK 181
           M+++ + A P  GA       R SDD  W Y F  + NNK+ V C+ C K  SGGI R K
Sbjct: 1   MSTTRSDAAPTPGAEGVNLLKRNSDDVGWEYGFLVDPNNKDKVKCKFCNKEMSGGIYRLK 60

Query: 182 EHLLHKSGQVTACPKVTIEIMKRISEFVQCKTKKKSDK 295
           +H+ H     T CPK T E  ++  + ++   +K+++K
Sbjct: 61  QHVAHDGKNTTKCPKCTDEAKEKCQKSLEGAKRKRAEK 98


>tpg|DAA53680.1| TPA: hypothetical protein ZEAMMB73_746371 [Zea mays]
          Length = 849

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 9/103 (8%)
 Frame = +2

Query: 5   STNPMNSSGASANPIGGA---------NSRKSDDPAWNYMFCPNSNNKNNVTCRLCLKNF 157
           S N M+S   + + + G            RKS DP W Y F P+  NK+ V C LC +  
Sbjct: 682 SDNIMSSPNEAPSSVAGEYDPKSDPTRKPRKSTDPGWKYGFWPDLQNKDKVECTLCGQVV 741

Query: 158 SGGISRAKEHLLHKSGQVTACPKVTIEIMKRISEFVQCKTKKK 286
           SGGI R K+HL    G    CPK +  + K ++ +++   +K+
Sbjct: 742 SGGIKRLKQHLAGVYGDAKLCPKASSGLRKEMTSYLEANKRKR 784


>gb|AFW65003.1| hypothetical protein ZEAMMB73_751466 [Zea mays]
          Length = 541

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/73 (42%), Positives = 44/73 (60%)
 Frame = +2

Query: 68  KSDDPAWNYMFCPNSNNKNNVTCRLCLKNFSGGISRAKEHLLHKSGQVTACPKVTIEIMK 247
           KS DPAWNY + P+ N K+ V C LC K    G+ R K+HL+   G V  CPK T  I K
Sbjct: 30  KSKDPAWNYCYWPDLNKKD-VKCILCGKIVHAGVRRLKQHLVGGHGDVAKCPKTTSAISK 88

Query: 248 RISEFVQCKTKKK 286
            +S++++   ++K
Sbjct: 89  EMSDYLKKNARQK 101


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