BLASTX nr result

ID: Coptis24_contig00037614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037614
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853...    94   1e-17
emb|CAN71593.1| hypothetical protein VITISV_015932 [Vitis vinifera]    94   1e-17
ref|XP_002524414.1| nucleotide binding protein, putative [Ricinu...    84   1e-14
ref|XP_002317805.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_003537197.1| PREDICTED: uncharacterized protein LOC100816...    69   6e-10

>ref|XP_003634172.1| PREDICTED: uncharacterized protein LOC100853102 [Vitis vinifera]
          Length = 864

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 46/78 (58%), Positives = 57/78 (73%)
 Frame = +3

Query: 324 PQISARQYVSLNAMLSSTIVAWSPVLRLSLETDSTHMNSLPNYFSLLSVGGKSGKISFWR 503
           P ++  QY S NAMLSS +VAWSPVL L  ETDS   ++  N FSLL+VGGKSGKISFWR
Sbjct: 209 PLVTVNQYASRNAMLSSLVVAWSPVLCLPPETDSAPPDNSSNCFSLLAVGGKSGKISFWR 268

Query: 504 IHEPQSYSIVQNGVHVDV 557
           +HEP SY++  + V + V
Sbjct: 269 VHEPLSYTVEHSRVPISV 286


>emb|CAN71593.1| hypothetical protein VITISV_015932 [Vitis vinifera]
          Length = 829

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 46/78 (58%), Positives = 57/78 (73%)
 Frame = +3

Query: 324 PQISARQYVSLNAMLSSTIVAWSPVLRLSLETDSTHMNSLPNYFSLLSVGGKSGKISFWR 503
           P ++  QY S NAMLSS +VAWSPVL L  ETDS   ++  N FSLL+VGGKSGKISFWR
Sbjct: 209 PLVTVNQYASRNAMLSSLVVAWSPVLCLPPETDSAPPDNSSNCFSLLAVGGKSGKISFWR 268

Query: 504 IHEPQSYSIVQNGVHVDV 557
           +HEP SY++  + V + V
Sbjct: 269 VHEPLSYTVEHSRVPISV 286


>ref|XP_002524414.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223536298|gb|EEF37949.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 847

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/69 (60%), Positives = 49/69 (71%)
 Frame = +3

Query: 324 PQISARQYVSLNAMLSSTIVAWSPVLRLSLETDSTHMNSLPNYFSLLSVGGKSGKISFWR 503
           PQI+A QY S +AMLSS +VAWSP+L LS +      N  P  FSL++VGGKSG IS WR
Sbjct: 272 PQITADQYASRSAMLSSVVVAWSPLLCLSSKISLVSQNDSPRRFSLIAVGGKSGNISLWR 331

Query: 504 IHEPQSYSI 530
           I  PQSYSI
Sbjct: 332 IDAPQSYSI 340


>ref|XP_002317805.1| predicted protein [Populus trichocarpa] gi|222858478|gb|EEE96025.1|
           predicted protein [Populus trichocarpa]
          Length = 894

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/78 (53%), Positives = 50/78 (64%)
 Frame = +3

Query: 324 PQISARQYVSLNAMLSSTIVAWSPVLRLSLETDSTHMNSLPNYFSLLSVGGKSGKISFWR 503
           P I+A +Y S  AMLSS ++AWSPVL L  +  S   N   N FS+L+VGGKSGKIS WR
Sbjct: 244 PLITAEKYASRCAMLSSLVIAWSPVLWLPSKICSAPENDSSNGFSILAVGGKSGKISVWR 303

Query: 504 IHEPQSYSIVQNGVHVDV 557
           I+ PQ YSI    V   V
Sbjct: 304 INVPQYYSIEHGRVPTTV 321


>ref|XP_003537197.1| PREDICTED: uncharacterized protein LOC100816957 [Glycine max]
          Length = 839

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 37/76 (48%), Positives = 49/76 (64%)
 Frame = +3

Query: 330 ISARQYVSLNAMLSSTIVAWSPVLRLSLETDSTHMNSLPNYFSLLSVGGKSGKISFWRIH 509
           +SA QY S +AML S +V+WSP+LRL+ E     +  + +  SLL+VGGKSGKIS WR H
Sbjct: 194 LSADQYASRSAMLCSLVVSWSPLLRLASE-----LYPVCDSVSLLAVGGKSGKISLWRFH 248

Query: 510 EPQSYSIVQNGVHVDV 557
            P+ Y+I    V   V
Sbjct: 249 PPECYTIEDREVPTTV 264


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