BLASTX nr result

ID: Coptis24_contig00037591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037591
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538920.1| PREDICTED: probable L-type lectin-domain con...    58   7e-07
ref|XP_002300537.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_003538920.1| PREDICTED: probable L-type lectin-domain containing receptor kinase
           S.5-like [Glycine max]
          Length = 691

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
 Frame = -1

Query: 231 IMMFPL-TCKAQIQNPFIYSAEKFNNSQYSFLTALDSTIDSTGAIQITPDTISNISIRQN 55
           +++FP  T +AQI     Y    FN S ++ LT L S   + GA+Q+TPD+  N+S+  N
Sbjct: 21  LLLFPAATSQAQILKKETYFFGPFNQSDFTTLTVLPSAAINLGALQVTPDSTGNVSL-AN 79

Query: 54  KSGRIMMTRNFTLWESN 4
            SGRI     FTLW+++
Sbjct: 80  HSGRIFFNNPFTLWDND 96


>ref|XP_002300537.1| predicted protein [Populus trichocarpa] gi|222847795|gb|EEE85342.1|
           predicted protein [Populus trichocarpa]
          Length = 682

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/82 (34%), Positives = 44/82 (53%)
 Frame = -1

Query: 249 LVFFISIMMFPLTCKAQIQNPFIYSAEKFNNSQYSFLTALDSTIDSTGAIQITPDTISNI 70
           +   IS ++F  + +AQ   PF      FN + Y      +    S  A+QITPD+I+  
Sbjct: 7   IAIIISFLIFAFS-QAQDLQPFHQEYGPFNETYYGIFEVEEPATISNSALQITPDSINGN 65

Query: 69  SIRQNKSGRIMMTRNFTLWESN 4
               N+SGR+M+ ++FTLWE +
Sbjct: 66  FTLANRSGRVMLNKSFTLWEDD 87


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