BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037587
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15551.3| unnamed protein product [Vitis vinifera]              272   2e-71
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi...   272   2e-71
emb|CAN74558.1| hypothetical protein VITISV_014799 [Vitis vinifera]   272   2e-71
ref|XP_002872815.1| pentatricopeptide repeat-containing protein ...   258   3e-67
ref|NP_192184.1| pentatricopeptide repeat-containing protein [Ar...   256   2e-66

>emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  272 bits (696), Expect = 2e-71
 Identities = 124/157 (78%), Positives = 146/157 (92%)
 Frame = -3

Query: 471 EYGITAKARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALLGASRVHGNTKLAE 292
           +YGITA ++HYTCMIDLLGR+GRL++A+ LM+NMPFEPDAATWGALLGASR+HGNT+L E
Sbjct: 443 DYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGE 502

Query: 291 EAAEKIFKMEPDNSGMYVLLSNLYADSGRWSDVGKMRVVMRDRGVKKVPGYSWIEVQNKV 112
           +AA+ IF+MEPDNSGMYVLLSNLYA SGRW DVG+MR+ MRDRGVKKVPGYSW+EVQNK+
Sbjct: 503 KAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKI 562

Query: 111 HTFWVGDSVHPEKDKIYAFLEDLDRRLKKEGYVSKTK 1
           HTF VGDSVHPE+D+IY FLE+LD ++KKEGYVS TK
Sbjct: 563 HTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTK 599


>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  272 bits (696), Expect = 2e-71
 Identities = 124/157 (78%), Positives = 146/157 (92%)
 Frame = -3

Query: 471 EYGITAKARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALLGASRVHGNTKLAE 292
           +YGITA ++HYTCMIDLLGR+GRL++A+ LM+NMPFEPDAATWGALLGASR+HGNT+L E
Sbjct: 524 DYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGE 583

Query: 291 EAAEKIFKMEPDNSGMYVLLSNLYADSGRWSDVGKMRVVMRDRGVKKVPGYSWIEVQNKV 112
           +AA+ IF+MEPDNSGMYVLLSNLYA SGRW DVG+MR+ MRDRGVKKVPGYSW+EVQNK+
Sbjct: 584 KAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKI 643

Query: 111 HTFWVGDSVHPEKDKIYAFLEDLDRRLKKEGYVSKTK 1
           HTF VGDSVHPE+D+IY FLE+LD ++KKEGYVS TK
Sbjct: 644 HTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTK 680


>emb|CAN74558.1| hypothetical protein VITISV_014799 [Vitis vinifera]
          Length = 405

 Score =  272 bits (696), Expect = 2e-71
 Identities = 124/157 (78%), Positives = 146/157 (92%)
 Frame = -3

Query: 471 EYGITAKARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALLGASRVHGNTKLAE 292
           +YGITA ++HYTCMIDLLGR+GRL++A+ LM+NMPFEPDAATWGALLGASR+HGNT+L E
Sbjct: 151 DYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGE 210

Query: 291 EAAEKIFKMEPDNSGMYVLLSNLYADSGRWSDVGKMRVVMRDRGVKKVPGYSWIEVQNKV 112
           +AA+ IF+MEPDNSGMYVLLSNLYA SGRW DVG+MR+ MRDRGVKKVPGYSW+EVQNK+
Sbjct: 211 KAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKI 270

Query: 111 HTFWVGDSVHPEKDKIYAFLEDLDRRLKKEGYVSKTK 1
           HTF VGDSVHPE+D+IY FLE+LD ++KKEGYVS TK
Sbjct: 271 HTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTK 307


>ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297318652|gb|EFH49074.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 776

 Score =  258 bits (660), Expect = 3e-67
 Identities = 120/156 (76%), Positives = 136/156 (87%)
 Frame = -3

Query: 471  EYGITAKARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALLGASRVHGNTKLAE 292
            +YG+   ++HY CM+DLLGR+G LEEA  LM+NMPFEPDAA WG LLGASRVHGNT+LAE
Sbjct: 534  DYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAE 593

Query: 291  EAAEKIFKMEPDNSGMYVLLSNLYADSGRWSDVGKMRVVMRDRGVKKVPGYSWIEVQNKV 112
             AA+KIF MEP+NSGMYVLLSNLYA SGRW DVGK+RV MRD+GVKKVPGYSWIE+QNK 
Sbjct: 594  TAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKT 653

Query: 111  HTFWVGDSVHPEKDKIYAFLEDLDRRLKKEGYVSKT 4
            HTF VGD  HPEKD+I+AFLEDLD R+KK GYVSKT
Sbjct: 654  HTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKT 689


>ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g02750 gi|4263522|gb|AAD15348.1| hypothetical protein
            [Arabidopsis thaliana] gi|7269760|emb|CAB77760.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332656824|gb|AEE82224.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  256 bits (653), Expect = 2e-66
 Identities = 118/156 (75%), Positives = 136/156 (87%)
 Frame = -3

Query: 471  EYGITAKARHYTCMIDLLGRSGRLEEAEALMRNMPFEPDAATWGALLGASRVHGNTKLAE 292
            +YG+   ++HY CM+DLLGR+G LE+A  LM+NMPFEPDAA WG LLGASRVHGNT+LAE
Sbjct: 539  DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAE 598

Query: 291  EAAEKIFKMEPDNSGMYVLLSNLYADSGRWSDVGKMRVVMRDRGVKKVPGYSWIEVQNKV 112
             AA+KIF MEP+NSGMYVLLSNLYA SGRW DVGK+RV MRD+GVKKVPGYSWIE+QNK 
Sbjct: 599  TAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKT 658

Query: 111  HTFWVGDSVHPEKDKIYAFLEDLDRRLKKEGYVSKT 4
            HTF VGD  HPEKD+I+AFLE+LD R+KK GYVSKT
Sbjct: 659  HTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 694