BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037580
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...    65   7e-09
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|NP_191445.1| putative F-box protein [Arabidopsis thaliana] g...    58   7e-07
ref|NP_186954.1| F-box protein [Arabidopsis thaliana] gi|7526377...    58   9e-07

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
 Frame = +1

Query: 1   VGTSVLSTRWKYVWTSVLTLDINDCLLFSPRLKRKIKDKSFMNFVDRMLFLRDVSNIRKF 180
           V TS+LS +W+++W S+  L+ + C         K K K FMN V+R+L LRD SNI KF
Sbjct: 61  VRTSILSRKWEHLWKSLSNLEFHQCYF-------KAKRKIFMNSVERVLLLRDSSNIEKF 113

Query: 181 TLRC---DYTHDASWINAWIS 234
           TL C   D T   +W++A ++
Sbjct: 114 TLSCGIDDATRTRTWVSAAVN 134


>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/79 (41%), Positives = 49/79 (62%)
 Frame = +1

Query: 1   VGTSVLSTRWKYVWTSVLTLDINDCLLFSPRLKRKIKDKSFMNFVDRMLFLRDVSNIRKF 180
           V TSVLS RW Y+WT +  LD +D    S     +I+   F++FVDR+L   +  +IR F
Sbjct: 50  VSTSVLSKRWIYLWTFITKLDFDDIGYCS---SNEIRKACFVDFVDRVLLRLNSEHIRSF 106

Query: 181 TLRCDYTHDASWINAWISL 237
           +L+    +D+S+IN WIS+
Sbjct: 107 SLKMSEKYDSSYINKWISI 125


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1   VGTSVLSTRWKYVWTSVLTLDINDCLLFSPRLKRKIKDKS--FMNFVDRMLFLRDVSNIR 174
           VGTSVLS RW+Y+W S+  LD +D LL          ++S  F NFVD++L    +S IR
Sbjct: 33  VGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKPIGDSERSICFKNFVDKVLLHGSISCIR 92

Query: 175 KFTLRCDYTHDASWINAWISLPL 243
           KF L+C      S +N+WI   L
Sbjct: 93  KFRLKCSDHELDSAVNSWICTAL 115


>ref|NP_191445.1| putative F-box protein [Arabidopsis thaliana]
           gi|75264355|sp|Q9LXR6.1|FB207_ARATH RecName:
           Full=Putative F-box protein At3g58860
           gi|7630081|emb|CAB88303.1| putative protein [Arabidopsis
           thaliana] gi|332646320|gb|AEE79841.1| putative F-box
           protein [Arabidopsis thaliana]
          Length = 457

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
 Frame = +1

Query: 7   TSVLSTRWKYVWTSVLTLDINDCLLFSPRLKRKIKD---KSFMNFVDRMLFLRDVSNIRK 177
           TSVL+ +W+Y++  V +LD ND     P+  ++ KD   +SFM+FVDR+L L+  S I+K
Sbjct: 32  TSVLAKKWRYLFAFVPSLDFNDSDFLHPQEGKREKDGILRSFMDFVDRVLALQGASPIKK 91

Query: 178 FTLRCDYTHDASWINAWI 231
           F+L      D   ++ WI
Sbjct: 92  FSLNVKTGVDPDRVDRWI 109


>ref|NP_186954.1| F-box protein [Arabidopsis thaliana]
           gi|75263775|sp|Q9LDJ9.1|FB133_ARATH RecName: Full=F-box
           protein At3g03040 gi|6714432|gb|AAF26120.1|AC012328_23
           unknown protein [Arabidopsis thaliana]
           gi|6728958|gb|AAF26956.1|AC018363_1 unknown protein
           [Arabidopsis thaliana] gi|332640374|gb|AEE73895.1| F-box
           protein [Arabidopsis thaliana]
          Length = 472

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
 Frame = +1

Query: 7   TSVLSTRWKYVWTSVLTLDINDCLLFSPRLKRKIKD---KSFMNFVDRMLFLRDVSNIRK 177
           TSVLS +W+ ++  V  LD +D     P   ++ +D   +SFM+FVDR+L L+  S+IRK
Sbjct: 27  TSVLSKKWRNLFALVPNLDFDDSEFLHPEEGKRERDGILQSFMDFVDRVLSLQGNSSIRK 86

Query: 178 FTLRCDYTHDASWINAWI 231
           F+L+C+     + +N W+
Sbjct: 87  FSLKCETGVPPARVNRWL 104