BLASTX nr result

ID: Coptis24_contig00037541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037541
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277307.2| PREDICTED: trihelix transcription factor GT-...   116   2e-24
emb|CAN71904.1| hypothetical protein VITISV_035582 [Vitis vinifera]   116   2e-24
ref|XP_002528594.1| transcription factor, putative [Ricinus comm...   113   1e-23
ref|XP_004171755.1| PREDICTED: LOW QUALITY PROTEIN: trihelix tra...   111   7e-23
ref|XP_004137874.1| PREDICTED: trihelix transcription factor GT-...   111   7e-23

>ref|XP_002277307.2| PREDICTED: trihelix transcription factor GT-2-like [Vitis vinifera]
           gi|297740072|emb|CBI30254.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/115 (53%), Positives = 72/115 (62%)
 Frame = +2

Query: 2   DDLNVVAFMENDSTDXXXXXXXXXXXXXXXXXIRDFVDSQMKKLMETQEAWLEKMLKTLE 181
           DD N     EN STD                 I+DF+DSQM+KLME QEAWLEKMLK LE
Sbjct: 264 DDHNNTGPTENGSTDKKNRRSRRSWKVK----IKDFIDSQMRKLMEKQEAWLEKMLKALE 319

Query: 182 QKEQERMLXXXXXXXXXXXXIDQEHNFWAKERAWFEARDAALMETLSKITGKELK 346
            KEQER+L            +D+EH FWA +RAW EARDAALM+TL K+TG+ELK
Sbjct: 320 HKEQERILREEEWRKQEAARLDREHKFWATQRAWIEARDAALMDTLQKLTGRELK 374


>emb|CAN71904.1| hypothetical protein VITISV_035582 [Vitis vinifera]
          Length = 636

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/115 (53%), Positives = 72/115 (62%)
 Frame = +2

Query: 2   DDLNVVAFMENDSTDXXXXXXXXXXXXXXXXXIRDFVDSQMKKLMETQEAWLEKMLKTLE 181
           DD N     EN STD                 I+DF+DSQM+KLME QEAWLEKMLK LE
Sbjct: 262 DDHNNTGPTENGSTDKKNRRSRRSWKVK----IKDFIDSQMRKLMEKQEAWLEKMLKALE 317

Query: 182 QKEQERMLXXXXXXXXXXXXIDQEHNFWAKERAWFEARDAALMETLSKITGKELK 346
            KEQER+L            +D+EH FWA +RAW EARDAALM+TL K+TG+ELK
Sbjct: 318 HKEQERILREEEWRKQEAARLDREHKFWATQRAWIEARDAALMDTLQKLTGRELK 372


>ref|XP_002528594.1| transcription factor, putative [Ricinus communis]
           gi|223531990|gb|EEF33802.1| transcription factor,
           putative [Ricinus communis]
          Length = 529

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/113 (50%), Positives = 73/113 (64%)
 Frame = +2

Query: 2   DDLNVVAFMENDSTDXXXXXXXXXXXXXXXXXIRDFVDSQMKKLMETQEAWLEKMLKTLE 181
           +DL+    +ENDS +                 I++F+DSQM+KL+E QEAWL+K+ KTLE
Sbjct: 229 NDLSTATLVENDSMEKRRKRRDGKSWKAK---IKEFIDSQMRKLIERQEAWLDKLTKTLE 285

Query: 182 QKEQERMLXXXXXXXXXXXXIDQEHNFWAKERAWFEARDAALMETLSKITGKE 340
           QKEQ+RML            ID+EH FWAKERAW EARDAALME L K+TG++
Sbjct: 286 QKEQQRMLREEEWRRQESARIDREHKFWAKERAWIEARDAALMEALKKLTGRD 338


>ref|XP_004171755.1| PREDICTED: LOW QUALITY PROTEIN: trihelix transcription factor
           GT-2-like, partial [Cucumis sativus]
          Length = 384

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/115 (47%), Positives = 75/115 (65%)
 Frame = +2

Query: 2   DDLNVVAFMENDSTDXXXXXXXXXXXXXXXXXIRDFVDSQMKKLMETQEAWLEKMLKTLE 181
           DDL  V  M+NDS +                 I+ F+DSQM+KL++ QEAWLEK++KTLE
Sbjct: 119 DDLGSVGVMDNDSMEKRRKKRGGKCWKAK---IKQFIDSQMRKLIDKQEAWLEKLMKTLE 175

Query: 182 QKEQERMLXXXXXXXXXXXXIDQEHNFWAKERAWFEARDAALMETLSKITGKELK 346
           QKE+ERM+            +D+E +FWAKERAW E+RDAALM+ L ++TG+EL+
Sbjct: 176 QKEKERMIRDEEWRRQEVSRMDRERSFWAKERAWIESRDAALMDALQRLTGRELR 230


>ref|XP_004137874.1| PREDICTED: trihelix transcription factor GT-2-like [Cucumis
           sativus]
          Length = 517

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/115 (47%), Positives = 75/115 (65%)
 Frame = +2

Query: 2   DDLNVVAFMENDSTDXXXXXXXXXXXXXXXXXIRDFVDSQMKKLMETQEAWLEKMLKTLE 181
           DDL  V  M+NDS +                 I+ F+DSQM+KL++ QEAWLEK++KTLE
Sbjct: 252 DDLGSVGVMDNDSMEKRRKKRGGKCWKAK---IKQFIDSQMRKLIDKQEAWLEKLMKTLE 308

Query: 182 QKEQERMLXXXXXXXXXXXXIDQEHNFWAKERAWFEARDAALMETLSKITGKELK 346
           QKE+ERM+            +D+E +FWAKERAW E+RDAALM+ L ++TG+EL+
Sbjct: 309 QKEKERMIRDEEWRRQEVSRMDRERSFWAKERAWIESRDAALMDALQRLTGRELR 363


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