BLASTX nr result

ID: Coptis24_contig00037531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037531
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163196.1| PREDICTED: LOW QUALITY PROTEIN: synaptonemal...    55   6e-06
ref|XP_004136213.1| PREDICTED: synaptonemal complex protein 1-li...    55   6e-06

>ref|XP_004163196.1| PREDICTED: LOW QUALITY PROTEIN: synaptonemal complex protein 1-like
           [Cucumis sativus]
          Length = 869

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/75 (40%), Positives = 40/75 (53%)
 Frame = +2

Query: 2   ENIRKSEEQLVELRTXXXXXXXXXXXXXSRITSRIEEKDSLIQDLEGAIAEKKLCLESLT 181
           E IR  E++L EL+               R    IEEKD +I+  E  + E +L +E L+
Sbjct: 177 ETIRDREKELAELKIEKEDNCKLYREQQQRTADLIEEKDCMIKRFEETVTENRLIIEGLS 236

Query: 182 SHLEEVQHDLNLKED 226
           S LEE Q +LNLKED
Sbjct: 237 SKLEEAQLELNLKED 251


>ref|XP_004136213.1| PREDICTED: synaptonemal complex protein 1-like [Cucumis sativus]
          Length = 869

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 30/75 (40%), Positives = 40/75 (53%)
 Frame = +2

Query: 2   ENIRKSEEQLVELRTXXXXXXXXXXXXXSRITSRIEEKDSLIQDLEGAIAEKKLCLESLT 181
           E IR  E++L EL+               R    IEEKD +I+  E  + E +L +E L+
Sbjct: 177 ETIRDREKELAELKIEKEDNCKLYREQQQRTADLIEEKDCMIKRFEETVTENRLIIEGLS 236

Query: 182 SHLEEVQHDLNLKED 226
           S LEE Q +LNLKED
Sbjct: 237 SKLEEAQLELNLKED 251


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