BLASTX nr result

ID: Coptis24_contig00037513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037513
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...    77   1e-12
ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...    76   3e-12
gb|ABD65133.1| hypothetical protein 40.t00008 [Brassica oleracea]      76   3e-12
ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arab...    74   1e-11
ref|XP_003525565.1| PREDICTED: uncharacterized protein LOC100814...    74   1e-11

>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/84 (42%), Positives = 49/84 (58%)
 Frame = -3

Query: 254 PMPVIGLYISTATLVLLLLMIRDVFHGYRRKKPWLPCEFFXXXXXXXXXXXXXXXLPFDL 75
           P+P+IG+Y++ A+L+  L M  D+ HG+R +K W PC+FF               L  DL
Sbjct: 20  PLPLIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNATSLTFIAVGIKLSVDL 79

Query: 74  TTPMPSPQDQLSKLCGTTFICISM 3
            T MPS QDQL+KL  T F+C  M
Sbjct: 80  NTSMPSRQDQLAKLSSTVFVCTVM 103


>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/84 (42%), Positives = 48/84 (57%)
 Frame = -3

Query: 254 PMPVIGLYISTATLVLLLLMIRDVFHGYRRKKPWLPCEFFXXXXXXXXXXXXXXXLPFDL 75
           P+P IG+Y++ A+L+  L M  D+ HG+R +K W PC+FF               L  DL
Sbjct: 20  PLPSIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNATSLTFIAVGIKLSVDL 79

Query: 74  TTPMPSPQDQLSKLCGTTFICISM 3
            T MPS QDQL+KL  T F+C  M
Sbjct: 80  NTSMPSRQDQLAKLSSTVFVCTVM 103


>gb|ABD65133.1| hypothetical protein 40.t00008 [Brassica oleracea]
          Length = 742

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = -3

Query: 254 PMPVIGLYISTATLVLLLLMIRDVFHGYRRKKPWLPCEFFXXXXXXXXXXXXXXXLPFDL 75
           P+P IG+Y++TA+L+    M  D+ H +R +K W PC++F               L  DL
Sbjct: 17  PLPSIGIYVATASLICGAAMFADLLHAFRHRKYWFPCKYFSLNATTLTFISVCVKLSLDL 76

Query: 74  TTPMPSPQDQLSKLCGTTFICISM 3
            TPMPS QDQL+KL  + F C+ M
Sbjct: 77  NTPMPSRQDQLAKLSSSVFFCVVM 100


>ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arabidopsis lyrata subsp.
           lyrata] gi|297315950|gb|EFH46373.1| hypothetical protein
           ARALYDRAFT_493150 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = -3

Query: 254 PMPVIGLYISTATLVLLLLMIRDVFHGYRRKKPWLPCEFFXXXXXXXXXXXXXXXLPFDL 75
           P+P IG+Y++ A+++  + M  D+ HG R +K W PC+FF               L  DL
Sbjct: 17  PLPSIGVYVAAASVICGVAMFSDLLHGLRHRKFWFPCKFFSLNATTLTFISVCVKLSLDL 76

Query: 74  TTPMPSPQDQLSKLCGTTFICISM 3
            TPMPS QDQL+KL  + F+C  M
Sbjct: 77  NTPMPSRQDQLAKLSSSVFVCTVM 100


>ref|XP_003525565.1| PREDICTED: uncharacterized protein LOC100814359 [Glycine max]
          Length = 759

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/84 (44%), Positives = 46/84 (54%)
 Frame = -3

Query: 254 PMPVIGLYISTATLVLLLLMIRDVFHGYRRKKPWLPCEFFXXXXXXXXXXXXXXXLPFDL 75
           PMP IG+YI+ A+L  L+ M  D+ HG R +K W PC+FF               L  DL
Sbjct: 20  PMPWIGIYIAAASLACLITMAADLIHGIRGRKLWFPCKFFCLNATSLAIIAVAVKLSVDL 79

Query: 74  TTPMPSPQDQLSKLCGTTFICISM 3
            TPMP  +DQLSKL  +  IC  M
Sbjct: 80  NTPMPHRRDQLSKLSSSALICTIM 103


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