BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037507
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516806.1| conserved hypothetical protein [Ricinus comm...    83   2e-14
ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, p...    77   2e-12
ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus ...    73   3e-11
ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]    71   1e-10

>ref|XP_002516806.1| conserved hypothetical protein [Ricinus communis]
           gi|223543894|gb|EEF45420.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 403

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 51/106 (48%), Positives = 63/106 (59%)
 Frame = -3

Query: 320 IWGSCNGLLCIQVENEHTLFLCNPSTRECKKLPEPSLKGYLAPFTGFGYNTISKDYLVVR 141
           IWGSCNGLLCI   +E +LFL NPSTRE KK+ E S   Y+  F GFGY++   DY VVR
Sbjct: 157 IWGSCNGLLCI-APDEDSLFLFNPSTRESKKILEES--NYVTAF-GFGYDSTRDDYKVVR 212

Query: 140 IFCPEARMEAQVYSLAKNSWRVIQPVDYRITAGKCNGIFFNNAFHW 3
           I    A + + VYSL  +SWR I    +       +G+F   A HW
Sbjct: 213 I---NAGVASSVYSLRTDSWRKIDNFCHDFCFHH-SGVFLRGAIHW 254


>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
 Frame = -3

Query: 323 TIWGSCNGLLCIQVENE-HTLFLCNPSTRECKKLPEPSLKGYLAPF-TGFGYNTISKDYL 150
           +I GSC+GL+CI+   + H +FL NPSTRE KKLP+PS       F TG GY++   DY 
Sbjct: 103 SIRGSCDGLVCIRNGGDVHDMFLWNPSTRESKKLPKPSSSVQKHGFLTGLGYDSTIDDYK 162

Query: 149 VVRIFCPEAR-----MEAQVYSLAKNSWRVIQPVDYRITAGKCNGIFFNNAFHW 3
           +V      A      M  +V++L  NSWR IQ +   IT     G+F+N A HW
Sbjct: 163 LVIACLTTANGSHQIMAPEVFTLKTNSWRRIQGIHSGITLEGGAGVFWNGALHW 216


>ref|XP_002531022.1| Transitional endoplasmic reticulum ATPase, putative [Ricinus
            communis] gi|223529397|gb|EEF31360.1| Transitional
            endoplasmic reticulum ATPase, putative [Ricinus communis]
          Length = 1029

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
 Frame = -3

Query: 320  IWGSCNGLLCIQVENEHTLFLCNPSTRECKKLPEPSLKGYLAPFTGFGYNTISKDYLVV- 144
            I GSCNGL+CI ++   T F+ NP T+EC+ LP+P        + GFGY+  + DY V+ 
Sbjct: 719  IVGSCNGLICIALDLS-TFFVLNPGTKECRALPDPGSYPDGVAYYGFGYDASADDYKVLK 777

Query: 143  ---RIFCPEARME-----AQVYSLAKNSWRVIQPVDYRITAGKCNGIFFNNAFHW 3
               R+   EA  E      +V+SL  NSWR IQ            GIF + A HW
Sbjct: 778  GHTRVVVKEAGYEHHESIVKVFSLRTNSWRTIQDSSPSYLPYPLPGIFVHGALHW 832


>ref|XP_002518045.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223542641|gb|EEF44178.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 406

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 4/110 (3%)
 Frame = -3

Query: 320 IWGSCNGLLCIQVENEHTLFLCNPSTRECKKLPEPSLKGYLAPFTGFGYNTISKDYLVV- 144
           I GSC+GL+C+ +++  T+FL NP+TR+ K+LP+P    Y     G GYN  + DY VV 
Sbjct: 151 ILGSCDGLVCL-LDDYGTMFLWNPTTRQYKELPKPKGAVYRMFLHGIGYNFSTDDYGVVF 209

Query: 143 -RIFCPEARME--AQVYSLAKNSWRVIQPVDYRITAGKCNGIFFNNAFHW 3
              F  +   E   ++Y+L  N+WR I+ VD        +GIF+N   +W
Sbjct: 210 ASRFTDDGNEETTVELYTLKNNTWRKIEDVDSTPEPSGRSGIFWNGGLYW 259


>ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]
          Length = 408

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 10/116 (8%)
 Frame = -3

Query: 320 IWGSCNGLLCIQV--------ENEHTLFLCNPSTRECKKLPEPSLKGYLAPFTGFGYNTI 165
           I  SC+GLLC+          +  H L L NPSTR+   LP PS   Y +   GFGY++ 
Sbjct: 89  ILDSCHGLLCLVDGFYGFHIHQPPHELVLWNPSTRQSNHLPFPSFVNYSSCLYGFGYDSY 148

Query: 164 SKDYLVVRIFCPEA--RMEAQVYSLAKNSWRVIQPVDYRITAGKCNGIFFNNAFHW 3
           S DY +VR+F   A  R    V+SL  N+WR +Q     +   +    FF  + HW
Sbjct: 149 SDDYKIVRVFSLSATHRTGFDVFSLKTNNWRRVQATHSSVIEYEL-ATFFKGSVHW 203