BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037397
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]              84   2e-14
gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsi...    78   6e-13
ref|XP_002331317.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002338691.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002336419.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>gb|ABW81060.1| GagPol3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/81 (53%), Positives = 55/81 (67%)
 Frame = +1

Query: 1   ASNNEAEYEAVIAGMRMAEEVGVKELTVYSDSNLVVCQANGGFVARCPRMAKYLDVLQKR 180
           ASNNEAEYEA+IAG+R+A+ VG KE+  Y DS LVV Q NG + A+  RM  YL+V +  
Sbjct: 488 ASNNEAEYEALIAGLRLAQGVGAKEILAYCDSQLVVNQFNGDYEAKDSRMEAYLEVAKDL 547

Query: 181 AARFAKVRFIHLGRGENRHAD 243
           +  F+K   I + RGEN  AD
Sbjct: 548 SKNFSKFELIRILRGENTTAD 568


>gb|AAD20433.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 889

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/81 (45%), Positives = 56/81 (69%)
 Frame = +1

Query: 1   ASNNEAEYEAVIAGMRMAEEVGVKELTVYSDSNLVVCQANGGFVARCPRMAKYLDVLQKR 180
           ASNNE+EYEA+IAG+++A+E G++E+  YSDS LV  Q +G + A+  RM  YL++++  
Sbjct: 680 ASNNESEYEALIAGIKLAQEKGIREIHAYSDSQLVTSQFHGEYEAKDERMEAYLELVKTL 739

Query: 181 AARFAKVRFIHLGRGENRHAD 243
           A +F   +   + RGEN  AD
Sbjct: 740 AQQFESFKLTRIPRGENTSAD 760


>ref|XP_002331317.1| predicted protein [Populus trichocarpa] gi|222873900|gb|EEF11031.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = +1

Query: 4   SNNEAEYEAVIAGMRMAEEVGVKELTVYSDSNLVVCQANGGFVARCPRMAKYLDVLQKRA 183
           +NN AEYEA I G+  A E+ ++++ VY DS L++CQ  G +  +  ++  Y + L K A
Sbjct: 178 TNNTAEYEACILGLEAALELNIRKIDVYGDSMLIICQVKGEWQTKEEKLRPYQEYLSKLA 237

Query: 184 ARFAKVRFIHLGRGENRHAD 243
             F ++ F HLGR  N+ AD
Sbjct: 238 GEFEEIEFTHLGREGNQFAD 257


>ref|XP_002338691.1| predicted protein [Populus trichocarpa] gi|222873212|gb|EEF10343.1|
           predicted protein [Populus trichocarpa]
          Length = 361

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/80 (42%), Positives = 48/80 (60%)
 Frame = +1

Query: 4   SNNEAEYEAVIAGMRMAEEVGVKELTVYSDSNLVVCQANGGFVARCPRMAKYLDVLQKRA 183
           +NN AEYEA I G+  A E+ +K+L VY DS L++CQ  G +  +  ++  Y + L   A
Sbjct: 266 TNNTAEYEACILGLEAALELKIKKLDVYGDSMLIICQVKGEWQTKEEKLRPYQEYLSTLA 325

Query: 184 ARFAKVRFIHLGRGENRHAD 243
             F ++RF HLGR  N  AD
Sbjct: 326 KEFEEIRFTHLGREGNHFAD 345


>ref|XP_002336419.1| predicted protein [Populus trichocarpa] gi|222834953|gb|EEE73402.1|
           predicted protein [Populus trichocarpa]
          Length = 533

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/80 (40%), Positives = 49/80 (61%)
 Frame = +1

Query: 4   SNNEAEYEAVIAGMRMAEEVGVKELTVYSDSNLVVCQANGGFVARCPRMAKYLDVLQKRA 183
           +NN AEYEA I G+  A E+ ++++ VY DS L++CQ  G +  +  ++  Y + L K A
Sbjct: 385 TNNTAEYEACILGLEAALELNIRKIDVYGDSMLIICQVKGEWQTKEEKLRPYQEYLSKLA 444

Query: 184 ARFAKVRFIHLGRGENRHAD 243
             F ++ F HLGR  N+ AD
Sbjct: 445 REFEEIEFTHLGREGNQFAD 464