BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037376
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum l...   228   4e-58
sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding pro...   228   4e-58
dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein...   225   3e-57
sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding pro...   224   6e-57
sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding pro...   224   7e-57

>gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum lycopersicum]
          Length = 267

 Score =  228 bits (581), Expect = 4e-58
 Identities = 106/113 (93%), Positives = 110/113 (97%)
 Frame = -1

Query: 341 SASEATGNGRVSMRKTATKSKPASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 162
           S+SE TGNGRV+MRKTATK+KPASSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 23  SSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82

Query: 161 TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 3
           TAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA
Sbjct: 83  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135


>sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding protein 3C, chloroplastic;
           AltName: Full=LHCII type I CAB-3C; Short=LHCP; Flags:
           Precursor gi|224932|prf||1204205G protein 3C,chlorophyll
           binding
          Length = 267

 Score =  228 bits (581), Expect = 4e-58
 Identities = 106/113 (93%), Positives = 110/113 (97%)
 Frame = -1

Query: 341 SASEATGNGRVSMRKTATKSKPASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 162
           S+SE TGNGRV+MRKTATK+KPASSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 23  SSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82

Query: 161 TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 3
           TAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA
Sbjct: 83  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135


>dbj|BAA25396.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 267

 Score =  225 bits (574), Expect = 3e-57
 Identities = 104/113 (92%), Positives = 109/113 (96%)
 Frame = -1

Query: 341 SASEATGNGRVSMRKTATKSKPASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 162
           S+SE TGNG+V+MRKTATK+KP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 23  SSSEITGNGKVTMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82

Query: 161 TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 3
           TAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA
Sbjct: 83  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 135


>sp|P27492.1|CB21_TOBAC RecName: Full=Chlorophyll a-b binding protein 16, chloroplastic;
           AltName: Full=LHCII type I CAB-16; Short=LHCP; Flags:
           Precursor gi|19819|emb|CAA36955.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 266

 Score =  224 bits (571), Expect = 6e-57
 Identities = 103/113 (91%), Positives = 109/113 (96%)
 Frame = -1

Query: 341 SASEATGNGRVSMRKTATKSKPASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 162
           S+SE TGNG+V+MRKTA+K+KP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 22  SSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 81

Query: 161 TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 3
           TAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA
Sbjct: 82  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 134


>sp|P12470.1|CB25_NICPL RecName: Full=Chlorophyll a-b binding protein E, chloroplastic;
           AltName: Full=LHCII type I CAB-E; Short=LHCP; Flags:
           Precursor gi|170212|gb|AAA34056.1| chlorophyll
           a/b-binding protein-E [Nicotiana plumbaginifolia]
          Length = 266

 Score =  224 bits (570), Expect = 7e-57
 Identities = 103/113 (91%), Positives = 108/113 (95%)
 Frame = -1

Query: 341 SASEATGNGRVSMRKTATKSKPASSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 162
           S+SE TGNG+V+MRKTA K+KP SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 22  SSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 81

Query: 161 TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKA 3
           TAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELLARNGVKFGEAVWFKA
Sbjct: 82  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKA 134