BLASTX nr result

ID: Coptis24_contig00037311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037311
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_001769341.1| predicted protein [Physcomitrella patens sub...    79   5e-13
ref|XP_002301715.1| predicted protein [Populus trichocarpa] gi|2...    78   7e-13
ref|XP_002335051.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    77   1e-12

>ref|XP_002302991.1| predicted protein [Populus trichocarpa] gi|222844717|gb|EEE82264.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 46/119 (38%), Positives = 67/119 (56%)
 Frame = +1

Query: 13  CEKLKILPEELGNLSSLKSFYISGCCELQCLPEVGRSSLVQLSIRDCSSLTTLLHVLRYK 192
           CEKL+ LPE + NL+SL+  +I G  ++  LP +  SS+  L I DC  LT++   L++ 
Sbjct: 302 CEKLESLPEGVQNLNSLEMLFIYGMPKITTLPGLP-SSIASLDILDCQELTSISEGLQHL 360

Query: 193 GTLQDLVISGCPNLDISKVEFYHLTALRSLIIGDFPEMATLPEGIRHAFMLQHFEILRC 369
             L+DL + GC  L+       HLT+L  L I     + +LPEGIR+  ML+   I  C
Sbjct: 361 TALKDLYLHGCVKLNSLPESIQHLTSLSRLRIHGCSNLMSLPEGIRNLEMLRELVITEC 419


>ref|XP_001769341.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679447|gb|EDQ65895.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 308

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
 Frame = +1

Query: 13  CEKLKILPEELGNLSSLKSFYISGCCELQCLPE--VGRSSLVQLSIRDCSSLTTLLHVLR 186
           C  LK LP EL NLSSLK+FY+SGC  L  LP      SSL+ L +  CS+LT+L + L+
Sbjct: 163 CSSLKSLPNELANLSSLKAFYLSGCSSLTSLPNELANLSSLIILDLSGCSTLTSLPNKLK 222

Query: 187 YKGTLQDLVISGCPNLDISKVEFYHLTALRSLIIGDFPEMATLPEGIRHAFMLQHFEILR 366
              +L  L +SGC +L     E  +L++L SL +     + +LP  + +   L    +  
Sbjct: 223 NLFSLTRLDLSGCSSLASLPNELANLSSLTSLNLSHCSRLTSLPNELANLSSLTILNLSC 282

Query: 367 CSS 375
           CSS
Sbjct: 283 CSS 285



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 42/123 (34%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
 Frame = +1

Query: 13  CEKLKILPEELGNLSSLKSFYISGCCELQCLPE--VGRSSLVQLSIRDCSSLTTLLHVLR 186
           C  L ILP +L N+SSL+S Y++ C  L  LP       +L  L + DC SLT L +   
Sbjct: 67  CSSLTILPNKLANISSLQSLYLNSCSRLISLPNELTNLYTLEALHLSDCLSLTHLPNECT 126

Query: 187 YKGTLQDLVISGCPNLDISKVEFYHLTALRSLIIGDFPEMATLPEGIRHAFMLQHFEILR 366
              +L++LV+SGC +L     E  +L+ L  L +     + +LP  + +   L+ F +  
Sbjct: 127 NLSSLKELVLSGCSSLISFPNELANLSFLTRLNLSGCSSLKSLPNELANLSSLKAFYLSG 186

Query: 367 CSS 375
           CSS
Sbjct: 187 CSS 189



 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 41/123 (33%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
 Frame = +1

Query: 13  CEKLKILPEELGNLSSLKSFYISGCCELQCLPE--VGRSSLVQLSIRDCSSLTTLLHVLR 186
           C  L  LP E  NLSSLK   +SGC  L   P      S L +L++  CSSL +L + L 
Sbjct: 115 CLSLTHLPNECTNLSSLKELVLSGCSSLISFPNELANLSFLTRLNLSGCSSLKSLPNELA 174

Query: 187 YKGTLQDLVISGCPNLDISKVEFYHLTALRSLIIGDFPEMATLPEGIRHAFMLQHFEILR 366
              +L+   +SGC +L     E  +L++L  L +     + +LP  +++ F L   ++  
Sbjct: 175 NLSSLKAFYLSGCSSLTSLPNELANLSSLIILDLSGCSTLTSLPNKLKNLFSLTRLDLSG 234

Query: 367 CSS 375
           CSS
Sbjct: 235 CSS 237



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
 Frame = +1

Query: 13  CEKLKILPEELGNLSSLKSFYISGCCELQCLPE--VGRSSLVQLSIRDCSSLTTLLHVLR 186
           C  L  LP EL NL SL+  Y++GC  L  LP   V  S L +L +  CSSLT L + L 
Sbjct: 19  CSSLTSLPNELANLFSLEELYLNGCSSLINLPNELVNLSYLRKLDLSYCSSLTILPNKLA 78

Query: 187 YKGTLQDLVISGCPNLDISKVEFYHLTALRSLIIGDFPEMATLPEGIRHAFMLQHFEILR 366
              +LQ L ++ C  L     E  +L  L +L + D   +  LP    +   L+   +  
Sbjct: 79  NISSLQSLYLNSCSRLISLPNELTNLYTLEALHLSDCLSLTHLPNECTNLSSLKELVLSG 138

Query: 367 CSS 375
           CSS
Sbjct: 139 CSS 141



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
 Frame = +1

Query: 10  SCEKLKILPEELGNLSSLKSFYISGCCELQCLPE--VGRSSLVQLSIRDCSSLTTLLHVL 183
           SC +L  LP EL NL +L++ ++S C  L  LP      SSL +L +  CSSL +  + L
Sbjct: 90  SCSRLISLPNELTNLYTLEALHLSDCLSLTHLPNECTNLSSLKELVLSGCSSLISFPNEL 149

Query: 184 RYKGTLQDLVISGCPNLDISKVEFYHLTALRSLIIGDFPEMATLPEGIRHAFMLQHFEIL 363
                L  L +SGC +L     E  +L++L++  +     + +LP  + +   L   ++ 
Sbjct: 150 ANLSFLTRLNLSGCSSLKSLPNELANLSSLKAFYLSGCSSLTSLPNELANLSSLIILDLS 209

Query: 364 RCSS 375
            CS+
Sbjct: 210 GCST 213


>ref|XP_002301715.1| predicted protein [Populus trichocarpa] gi|222843441|gb|EEE80988.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
 Frame = +1

Query: 13  CEKLKILPEELGNLSSLKSFYISGCCELQCLPE---VGRSSLVQLSIRDCSSLTTLLHVL 183
           C++L+ LPE L NL+SL+S +I+ C  L+ LP     G  SL +L +  C  L +L   +
Sbjct: 442 CDELESLPEGLQNLNSLESLHINSCGGLKSLPINGLCGLHSLRRLHVLGCDKLASLSKGV 501

Query: 184 RYKGTLQDLVISGCPNLDISKVEFYHLTALRSLIIGDFPEMATLPEGIRHAFMLQHFEIL 363
           +Y   L+ L I GC  L+       HLT+LRSL I D   +++LP  I H   L H  I 
Sbjct: 502 QYLTALEHLYIHGCSQLNSLPQSIQHLTSLRSLTICDCKGISSLPNQIGHLMSLSHLRIS 561

Query: 364 RC 369
            C
Sbjct: 562 DC 563


>ref|XP_002335051.1| predicted protein [Populus trichocarpa] gi|222832701|gb|EEE71178.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 47/105 (44%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
 Frame = +1

Query: 4   IWSCEKLKILPEE-LGNLSSLKSFYISGCCELQCLPE---VGRSSLVQLSIRDCSSLTTL 171
           IW C KL+ LPEE L NL+SL+   I  C  L CLP     G SSL +L+I+ C   T+L
Sbjct: 23  IWECGKLESLPEEGLRNLNSLEFLMIFDCGRLNCLPMNGLCGLSSLRRLNIQYCDKFTSL 82

Query: 172 LHVLRYKGTLQDLVISGCPNLDISKVEFYHLTALRSLIIGDFPEM 306
              +R+   L+DL +S CP L+       HLT+LRSL I D P +
Sbjct: 83  SEGVRHLTALEDLWLSECPELNSLPESIQHLTSLRSLTIWDCPNL 127



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 43/113 (38%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
 Frame = +1

Query: 43  LGNLSSLKSFYISGCCELQCLPEVG---RSSLVQLSIRDCSSLTTL-LHVLRYKGTLQDL 210
           L NLSSLK   I  C +L+ LPE G    +SL  L I DC  L  L ++ L    +L+ L
Sbjct: 12  LDNLSSLKRLSIWECGKLESLPEEGLRNLNSLEFLMIFDCGRLNCLPMNGLCGLSSLRRL 71

Query: 211 VISGCPNLDISKVEFYHLTALRSLIIGDFPEMATLPEGIRHAFMLQHFEILRC 369
            I  C           HLTAL  L + + PE+ +LPE I+H   L+   I  C
Sbjct: 72  NIQYCDKFTSLSEGVRHLTALEDLWLSECPELNSLPESIQHLTSLRSLTIWDC 124


>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222844635|gb|EEE82182.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1075

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
 Frame = +1

Query: 4    IWSCEKLKILPEE-LGNLSSLKSFYISGCCELQCLPE---VGRSSLVQLSIRDCSSLTTL 171
            IW C KL  LPEE L NL+SL+S YI GC  L CLP     G SSL +L +  C   T+L
Sbjct: 947  IWYCGKLGSLPEEGLRNLNSLESLYIRGCGRLNCLPMDGLCGLSSLRKLVVGSCDKFTSL 1006

Query: 172  LHVLRYKGTLQDLVISGCPNLDISKVEFYHLTALRSLIIGDFPEM 306
               +R+   L+DL + GCP L+       HLT+L+ L I   P +
Sbjct: 1007 SEGVRHLTALEDLHLDGCPELNSLPESIQHLTSLQYLSIWGCPNL 1051


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