BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037291
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...   206   2e-51
ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat...   204   6e-51
ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   197   7e-49
ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat...   197   7e-49
ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat...   197   1e-48

>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355499507|gb|AES80710.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  206 bits (524), Expect = 2e-51
 Identities = 100/147 (68%), Positives = 121/147 (82%), Gaps = 1/147 (0%)
 Frame = +1

Query: 1    VMWSSVLHSCKIHGNQELAQKSADLLFNME-LRDAGPYVMMSNIFAAAGKWDDVGRVKKS 177
            +MWSSVL+SC IH NQELA+K+A+ LFNM+ LRDA PYV MSNI+AAAG+WD+VG+VKK+
Sbjct: 671  IMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKA 730

Query: 178  MRERGVKKVPAHSWVEIKQKTHVFSSNDKMHPQMDAINRXXXXXXXXXXXXGYKPDTSCY 357
            MRERGVKKVPA+SWVEIK KTHVF++NDK HPQM  I +            GYKPD+SC 
Sbjct: 731  MRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCA 790

Query: 358  LHNVEDNIKVESLMYHSERLAIAYALI 438
            LHNV++ +KVESL YHSER+AIA+ALI
Sbjct: 791  LHNVDEEVKVESLKYHSERIAIAFALI 817


>ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like [Glycine max]
          Length = 815

 Score =  204 bits (519), Expect = 6e-51
 Identities = 97/147 (65%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
 Frame = +1

Query: 1    VMWSSVLHSCKIHGNQELAQKSADLLFNME-LRDAGPYVMMSNIFAAAGKWDDVGRVKKS 177
            +MWSS+L+SC+IH NQELA K+AD LFNM+ LRDA PYV MSNI+AAAG+WD VG+VKK+
Sbjct: 612  IMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKA 671

Query: 178  MRERGVKKVPAHSWVEIKQKTHVFSSNDKMHPQMDAINRXXXXXXXXXXXXGYKPDTSCY 357
            +RERG++KVPA+SWVEIKQKTHVFS+ND  HPQ   I R            GYKPD++C 
Sbjct: 672  LRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCA 731

Query: 358  LHNVEDNIKVESLMYHSERLAIAYALI 438
            LHNV++ +KVESL YHSER+AIA+ALI
Sbjct: 732  LHNVDEEVKVESLKYHSERIAIAFALI 758


>ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At2g01510-like [Cucumis
            sativus]
          Length = 816

 Score =  197 bits (501), Expect = 7e-49
 Identities = 94/147 (63%), Positives = 118/147 (80%), Gaps = 1/147 (0%)
 Frame = +1

Query: 1    VMWSSVLHSCKIHGNQELAQKSADLLFNME-LRDAGPYVMMSNIFAAAGKWDDVGRVKKS 177
            +MWSSVL+SC+IH N ELA+K+AD LFNME LRDA PY+ MSNI+A AG+WD+V +VKK+
Sbjct: 613  IMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKA 672

Query: 178  MRERGVKKVPAHSWVEIKQKTHVFSSNDKMHPQMDAINRXXXXXXXXXXXXGYKPDTSCY 357
            MR+RGV+KVPA+SWVEIK +THVFS+NDK HP+M  I R            GYKPDT+C 
Sbjct: 673  MRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCA 732

Query: 358  LHNVEDNIKVESLMYHSERLAIAYALI 438
            LH+V++ IK+ESL YHSER AIA+AL+
Sbjct: 733  LHDVDEVIKIESLKYHSERFAIAFALM 759


>ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  197 bits (501), Expect = 7e-49
 Identities = 94/147 (63%), Positives = 118/147 (80%), Gaps = 1/147 (0%)
 Frame = +1

Query: 1    VMWSSVLHSCKIHGNQELAQKSADLLFNME-LRDAGPYVMMSNIFAAAGKWDDVGRVKKS 177
            +MWSSVL+SC+IH N ELA+K+AD LFNME LRDA PY+ MSNI+A AG+WD+V +VKK+
Sbjct: 613  IMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKA 672

Query: 178  MRERGVKKVPAHSWVEIKQKTHVFSSNDKMHPQMDAINRXXXXXXXXXXXXGYKPDTSCY 357
            MR+RGV+KVPA+SWVEIK +THVFS+NDK HP+M  I R            GYKPDT+C 
Sbjct: 673  MRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCA 732

Query: 358  LHNVEDNIKVESLMYHSERLAIAYALI 438
            LH+V++ IK+ESL YHSER AIA+AL+
Sbjct: 733  LHDVDEVIKIESLKYHSERFAIAFALM 759


>ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  197 bits (500), Expect = 1e-48
 Identities = 93/147 (63%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
 Frame = +1

Query: 1    VMWSSVLHSCKIHGNQELAQKSADLLFNME-LRDAGPYVMMSNIFAAAGKWDDVGRVKKS 177
            +MWSSVL++C+IH NQELA+++AD LFNME LRDA PYV MSNI+AAAG+W++V +V K+
Sbjct: 622  IMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKA 681

Query: 178  MRERGVKKVPAHSWVEIKQKTHVFSSNDKMHPQMDAINRXXXXXXXXXXXXGYKPDTSCY 357
            MR+RGVKK+PA+SWVEIK +TH+FS+ND+ HPQ++ I +            GYKPDTSC 
Sbjct: 682  MRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCA 741

Query: 358  LHNVEDNIKVESLMYHSERLAIAYALI 438
            LHN ++  KVESL YHSERLAIA+ALI
Sbjct: 742  LHNEDEKFKVESLKYHSERLAIAFALI 768