BLASTX nr result

ID: Coptis24_contig00037239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037239
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61843.1| hypothetical protein VITISV_004818 [Vitis vinifera]    64   1e-08
ref|XP_002516739.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>emb|CAN61843.1| hypothetical protein VITISV_004818 [Vitis vinifera]
          Length = 220

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/54 (61%), Positives = 41/54 (75%), Gaps = 2/54 (3%)
 Frame = +3

Query: 3   KGCGG--IVRKSYASIEDLKGLGSSVSSAINGEGKGVGRSFRGIQKTVLGYRQY 158
           KG GG  + RKSYAS+E+LKG  S+ ++AINGE +G   + RGI KTVLGYRQY
Sbjct: 167 KGGGGGLMARKSYASVEELKGFSSAAANAINGENRGGRTNNRGIGKTVLGYRQY 220


>ref|XP_002516739.1| conserved hypothetical protein [Ricinus communis]
           gi|223544112|gb|EEF45637.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 202

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/49 (61%), Positives = 38/49 (77%)
 Frame = +3

Query: 12  GGIVRKSYASIEDLKGLGSSVSSAINGEGKGVGRSFRGIQKTVLGYRQY 158
           G + RKSYAS+E+LKGL  + ++AINGE +G  R  RGI KTVLGYRQ+
Sbjct: 155 GLMARKSYASLEELKGLSMAAATAINGESRG-RRGGRGIGKTVLGYRQF 202


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