BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037218
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46
emb|CBI39641.3| unnamed protein product [Vitis vinifera]              189   3e-46
ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containi...   181   4e-44
ref|XP_002330058.1| predicted protein [Populus trichocarpa] gi|2...   180   9e-44
ref|XP_003623648.1| Pentatricopeptide repeat-containing protein ...   179   3e-43

>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  189 bits (479), Expect = 3e-46
 Identities = 85/121 (70%), Positives = 105/121 (86%)
 Frame = -2

Query: 365 WNSMITGYAQHGLGGEALQVFQEMCSAGMLPDDVTFIGILSACSYTGRVEDGMKFFESMR 186
           WNS+ITGYAQHGL  EALQVF EMCS+GM  D VTF+G+LSACSYTG+V++G++ FESM+
Sbjct: 399 WNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMK 458

Query: 185 LKYSVEPTAEHYACVVDLLGRAGLVHKALNMIENMPIQADDVIWGALLGACRMHMNMEVA 6
            KY VEP  EHYAC+VDLLGRAGLV+ A+++I+ MP++AD +IWGALLGACR HMNM +A
Sbjct: 459 SKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLA 518

Query: 5   E 3
           E
Sbjct: 519 E 519


>emb|CBI39641.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  189 bits (479), Expect = 3e-46
 Identities = 85/121 (70%), Positives = 105/121 (86%)
 Frame = -2

Query: 365 WNSMITGYAQHGLGGEALQVFQEMCSAGMLPDDVTFIGILSACSYTGRVEDGMKFFESMR 186
           WNS+ITGYAQHGL  EALQVF EMCS+GM  D VTF+G+LSACSYTG+V++G++ FESM+
Sbjct: 2   WNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMK 61

Query: 185 LKYSVEPTAEHYACVVDLLGRAGLVHKALNMIENMPIQADDVIWGALLGACRMHMNMEVA 6
            KY VEP  EHYAC+VDLLGRAGLV+ A+++I+ MP++AD +IWGALLGACR HMNM +A
Sbjct: 62  SKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLA 121

Query: 5   E 3
           E
Sbjct: 122 E 122


>ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  181 bits (460), Expect = 4e-44
 Identities = 78/121 (64%), Positives = 104/121 (85%)
 Frame = -2

Query: 365 WNSMITGYAQHGLGGEALQVFQEMCSAGMLPDDVTFIGILSACSYTGRVEDGMKFFESMR 186
           WNSMITGY+QHGLG EAL VF +MCS+G+ PDDVTFIG+LSACSY+G+V++G++ FE+M+
Sbjct: 407 WNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMK 466

Query: 185 LKYSVEPTAEHYACVVDLLGRAGLVHKALNMIENMPIQADDVIWGALLGACRMHMNMEVA 6
            KY VEP  EHYAC+VDLLGRA  V++A+ ++E MP++ D ++WGALLGACR HM +++A
Sbjct: 467 CKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLA 526

Query: 5   E 3
           E
Sbjct: 527 E 527


>ref|XP_002330058.1| predicted protein [Populus trichocarpa] gi|222871483|gb|EEF08614.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  180 bits (457), Expect = 9e-44
 Identities = 76/121 (62%), Positives = 105/121 (86%)
 Frame = -2

Query: 365 WNSMITGYAQHGLGGEALQVFQEMCSAGMLPDDVTFIGILSACSYTGRVEDGMKFFESMR 186
           WNS+I GYAQHG G +AL+VF +M S+ + PD++TFIG+LSACSYTG+V++G++ FESM+
Sbjct: 266 WNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMK 325

Query: 185 LKYSVEPTAEHYACVVDLLGRAGLVHKALNMIENMPIQADDVIWGALLGACRMHMNMEVA 6
            KY V+P  EHYAC+VDLLGRAG +++A+N+IENMP++AD ++WGALLGACR H N+++A
Sbjct: 326 SKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLA 385

Query: 5   E 3
           E
Sbjct: 386 E 386


>ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498663|gb|AES79866.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  179 bits (453), Expect = 3e-43
 Identities = 77/121 (63%), Positives = 102/121 (84%)
 Frame = -2

Query: 365 WNSMITGYAQHGLGGEALQVFQEMCSAGMLPDDVTFIGILSACSYTGRVEDGMKFFESMR 186
           WNSMITGY+QHGLG EAL VF +MCS+G+ PD+VTFIG+LSACSY+G+V++G + FE+M+
Sbjct: 404 WNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMK 463

Query: 185 LKYSVEPTAEHYACVVDLLGRAGLVHKALNMIENMPIQADDVIWGALLGACRMHMNMEVA 6
             Y VEP  EHYAC+VDLLGRAG V +A+ ++E MP++ D ++WGALLGACR HM +++A
Sbjct: 464 CTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLA 523

Query: 5   E 3
           E
Sbjct: 524 E 524