BLASTX nr result

ID: Coptis24_contig00037211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037211
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF70006.1| transport protein-related [Musa acuminata]              62   4e-08
gb|AAT78760.1| putative transport protein [Oryza sativa Japonica...    57   2e-06
tpg|DAA50264.1| TPA: hypothetical protein ZEAMMB73_682500 [Zea m...    54   1e-05

>gb|ABF70006.1| transport protein-related [Musa acuminata]
          Length = 745

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 3/71 (4%)
 Frame = -3

Query: 241 SIEHNSSDWSEKSSVTIRPMSRIERAKLETMKAFSFQD---GNARSESESSLDKILVKPV 71
           +I+ N  D   ++S   + MSR+ERAK+E +K FS+Q+   G   +     LDKILVKP+
Sbjct: 532 NIDFNPVDEMHQAS---KRMSRVERAKIEVLKTFSYQERNRGGGDALETMGLDKILVKPI 588

Query: 70  HRLEKEKKQAL 38
           HRLEKEK QAL
Sbjct: 589 HRLEKEKMQAL 599


>gb|AAT78760.1| putative transport protein [Oryza sativa Japonica Group]
           gi|108709725|gb|ABF97520.1| expressed protein [Oryza
           sativa Japonica Group] gi|222625342|gb|EEE59474.1|
           hypothetical protein OsJ_11682 [Oryza sativa Japonica
           Group]
          Length = 901

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = -3

Query: 184 MSRIERAKLETMKAFSFQDGNARSESESSLDKILVKPVHRLEKEKKQALALG 29
           ++RIE AKLE + +F  +DGNA    +  LDKIL++P+HRLE+EKK+AL  G
Sbjct: 562 LTRIEAAKLEALNSFCTKDGNA---FDVGLDKILIRPIHRLEREKKKALEHG 610


>tpg|DAA50264.1| TPA: hypothetical protein ZEAMMB73_682500 [Zea mays]
          Length = 862

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/48 (54%), Positives = 37/48 (77%)
 Frame = -3

Query: 184 MSRIERAKLETMKAFSFQDGNARSESESSLDKILVKPVHRLEKEKKQA 41
           ++R+E A+LE +K+F   DGNA    ++ LDKI VKP+HRLEKEK++A
Sbjct: 570 LTRLEAARLEALKSFCTIDGNAL---DAGLDKIFVKPIHRLEKEKREA 614


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