BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037121
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]   169   3e-40
ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containi...   168   5e-40
ref|XP_002532248.1| pentatricopeptide repeat-containing protein,...   165   4e-39
ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containi...   155   3e-36
ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containi...   154   5e-36

>emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/124 (66%), Positives = 99/124 (79%)
 Frame = +2

Query: 11  GLCFDKRFDEAIGMLERLPYEGVYLNKASYRVVLNFLLKEKEIERAVYVLGLMLGRGFVP 190
           GLC + RF+EA GMLERLPYEGVYLNKASYR+VLN L +E E+++A  ++GLMLGRG +P
Sbjct: 429 GLCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLP 488

Query: 191 HFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKTFSLL 370
           HFATSNE+L+  CEAGKV DA  AL  L+E GFKPE  +W  LV+ ICRERKL+  F LL
Sbjct: 489 HFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELL 548

Query: 371 DELV 382
           D+LV
Sbjct: 549 DDLV 552



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/126 (25%), Positives = 57/126 (45%)
 Frame = +2

Query: 2   LFKGLCFDKRFDEAIGMLERLPYEGVYLNKASYRVVLNFLLKEKEIERAVYVLGLMLGRG 181
           L  G C   + D A+ ++E +   G   N  +Y  ++N   KE  +E A  V   M   G
Sbjct: 321 LINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLG 380

Query: 182 FVPHFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKTF 361
             P       ++  FC AG+V++A   L  + E   + +  T+  ++  +CRE +  +  
Sbjct: 381 LKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAX 440

Query: 362 SLLDEL 379
            +L+ L
Sbjct: 441 GMLERL 446


>ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/124 (66%), Positives = 99/124 (79%)
 Frame = +2

Query: 11  GLCFDKRFDEAIGMLERLPYEGVYLNKASYRVVLNFLLKEKEIERAVYVLGLMLGRGFVP 190
           GLC + RF+EA GMLERLPYEGVYLNKASYR+VLN L +E E+++A  ++GLMLGRG +P
Sbjct: 386 GLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLP 445

Query: 191 HFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKTFSLL 370
           HFATSNE+L+  CEAGKV DA  AL  L+E GFKPE  +W  LV+ ICRERKL+  F LL
Sbjct: 446 HFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELL 505

Query: 371 DELV 382
           D+LV
Sbjct: 506 DDLV 509



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/126 (25%), Positives = 58/126 (46%)
 Frame = +2

Query: 2   LFKGLCFDKRFDEAIGMLERLPYEGVYLNKASYRVVLNFLLKEKEIERAVYVLGLMLGRG 181
           L  G C  ++ D A+ ++E +   G   N  +Y  ++N   KE  +E A  V   M   G
Sbjct: 278 LINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLG 337

Query: 182 FVPHFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKTF 361
             P       ++  FC AG+V++A   L  + E   + +  T+  ++  +CRE +  +  
Sbjct: 338 LKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEAR 397

Query: 362 SLLDEL 379
            +L+ L
Sbjct: 398 GMLERL 403



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   LFKGLCFDKRFDEAIGMLERLPYEGVYLNKA-SYRVVLNFLLKEKEIERAVYVLGLMLGR 178
           L  GLC   R  EAI + E +  +   L  A +Y  ++N     ++++RA+ ++  M   
Sbjct: 242 LINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKN 301

Query: 179 GFVPHFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKT 358
           G  P+    + ++  FC+ G++E+A      +   G KP+   +  L+   CR  ++ + 
Sbjct: 302 GCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEA 361

Query: 359 FSLLDEL 379
             LL ++
Sbjct: 362 MELLKDM 368


>ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528066|gb|EEF30142.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 521

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/127 (61%), Positives = 100/127 (78%)
 Frame = +2

Query: 2   LFKGLCFDKRFDEAIGMLERLPYEGVYLNKASYRVVLNFLLKEKEIERAVYVLGLMLGRG 181
           L KGLC + RFDEA+ MLE L YEGVYLNK SYR+VLNFL ++ E+E++  +LGLML RG
Sbjct: 382 LLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRG 441

Query: 182 FVPHFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKTF 361
           FVPH+ATSNE+L+  CEAG V++A TAL+ L + GF PE ++W  L++ ICRERKL+  F
Sbjct: 442 FVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVF 501

Query: 362 SLLDELV 382
            L+DELV
Sbjct: 502 ELVDELV 508



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/126 (27%), Positives = 58/126 (46%)
 Frame = +2

Query: 2   LFKGLCFDKRFDEAIGMLERLPYEGVYLNKASYRVVLNFLLKEKEIERAVYVLGLMLGRG 181
           L KG C   + D A  ++E +   G   N  +Y V++N   KE  +E A  V   M   G
Sbjct: 277 LIKGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSG 336

Query: 182 FVPHFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKTF 361
             P       ++  FC  G++++A   L  + E   K +  T+  L+K +CRE +  +  
Sbjct: 337 LKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEAL 396

Query: 362 SLLDEL 379
            +L+ L
Sbjct: 397 RMLENL 402


>ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
           gi|449497032|ref|XP_004160294.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g18475-like [Cucumis sativus]
          Length = 504

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/124 (58%), Positives = 94/124 (75%)
 Frame = +2

Query: 11  GLCFDKRFDEAIGMLERLPYEGVYLNKASYRVVLNFLLKEKEIERAVYVLGLMLGRGFVP 190
           GLC + RFDEA+ M+++LP+EG YLNK SYR+VLNFL ++ E+ +A  +LGLML RGFVP
Sbjct: 376 GLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVP 435

Query: 191 HFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKTFSLL 370
           H ATSN +L+  C  G V+DA  +L  L+E GFKPE+E+WF LV  ICRERK++  F LL
Sbjct: 436 HHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFELL 495

Query: 371 DELV 382
           D LV
Sbjct: 496 DVLV 499


>ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Glycine max]
          Length = 546

 Score =  154 bits (390), Expect = 5e-36
 Identities = 75/127 (59%), Positives = 97/127 (76%)
 Frame = +2

Query: 2   LFKGLCFDKRFDEAIGMLERLPYEGVYLNKASYRVVLNFLLKEKEIERAVYVLGLMLGRG 181
           L  GLC + +F+EA+ M+E+LP +GVYLNK SYR+VLN L ++ E++RA  +LGLML RG
Sbjct: 416 LLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLRRG 475

Query: 182 FVPHFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKTF 361
           F PH+ATSNE+L+  C+AG V+DA  AL+ LVE GF+P  ETW  L+  ICRERKL+  F
Sbjct: 476 FQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRERKLLYVF 535

Query: 362 SLLDELV 382
            LLDELV
Sbjct: 536 ELLDELV 542



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   LFKGLCFDKRFDEAIGMLERL-PYEGVYLNKASYRVVLNFLLKEKEIERAVYVLGLMLGR 178
           L  GLC + R  EA  + E +   + +  +  +Y V++N   +  + +RA  V+  M   
Sbjct: 275 LMDGLCRNGRVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSN 334

Query: 179 GFVPHFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKT 358
           G  P+    + ++   C+ GK+EDA   L  +   G KP+  T+  L+  +CR  K  + 
Sbjct: 335 GCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEA 394

Query: 359 FSLLDEL 379
             LL+E+
Sbjct: 395 IELLEEM 401



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/126 (26%), Positives = 60/126 (47%)
 Frame = +2

Query: 2   LFKGLCFDKRFDEAIGMLERLPYEGVYLNKASYRVVLNFLLKEKEIERAVYVLGLMLGRG 181
           L  G C   + D A  +++ +   G Y N  +Y  +++ L K  ++E A  VL  + G G
Sbjct: 311 LINGFCRGGKPDRARNVIQFMKSNGCYPNVYNYSALVDGLCKVGKLEDAKGVLAEIKGSG 370

Query: 182 FVPHFATSNEVLISFCEAGKVEDATTALYSLVEKGFKPEYETWFQLVKSICRERKLVKTF 361
             P   T   ++   C  GK ++A   L  + E G + +  T+  L+  +CRE K  +  
Sbjct: 371 LKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTFNVLLGGLCREGKFEEAL 430

Query: 362 SLLDEL 379
            ++++L
Sbjct: 431 DMVEKL 436