BLASTX nr result

ID: Coptis24_contig00037047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037047
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]    60   3e-14
emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]    60   3e-14
emb|CAN69408.1| hypothetical protein VITISV_014748 [Vitis vinifera]    58   9e-14
emb|CBI20118.3| unnamed protein product [Vitis vinifera]               58   2e-13
emb|CAN81845.1| hypothetical protein VITISV_037891 [Vitis vinifera]    49   1e-10

>emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]
          Length = 2026

 Score = 60.5 bits (145), Expect(2) = 3e-14
 Identities = 29/45 (64%), Positives = 33/45 (73%)
 Frame = +2

Query: 65  CVDYTKGKQSKHTKKIATRNIDPSEIIYIDICGHFDVPFFCGEKY 199
           CVD  KGKQ+KHTKK ATR+ +  EII+ DICG   VP F GEKY
Sbjct: 283 CVDCIKGKQTKHTKKGATRSNELLEIIHTDICGPLSVPCFTGEKY 327



 Score = 42.4 bits (98), Expect(2) = 3e-14
 Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +1

Query: 181 FLRRKIFITFIDDFSCYCCLHLLHDKSQSVNVVEYS*LRL-KEIDKNVK 324
           F   K FITFIDD S Y  ++L+H+KSQ++++ E     + +++DK +K
Sbjct: 322 FTGEKYFITFIDDLSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIK 370


>emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]
          Length = 1180

 Score = 60.5 bits (145), Expect(2) = 3e-14
 Identities = 29/45 (64%), Positives = 33/45 (73%)
 Frame = +2

Query: 65  CVDYTKGKQSKHTKKIATRNIDPSEIIYIDICGHFDVPFFCGEKY 199
           CVD  KGKQ+KHTKK ATR+ +  EII+ DICG   VP F GEKY
Sbjct: 441 CVDCIKGKQTKHTKKGATRSNELLEIIHTDICGPLSVPCFTGEKY 485



 Score = 42.4 bits (98), Expect(2) = 3e-14
 Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +1

Query: 181 FLRRKIFITFIDDFSCYCCLHLLHDKSQSVNVVEYS*LRL-KEIDKNVK 324
           F   K FITFIDD S Y  ++L+H+KSQ++++ E     + +++DK +K
Sbjct: 480 FTGEKYFITFIDDLSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIK 528


>emb|CAN69408.1| hypothetical protein VITISV_014748 [Vitis vinifera]
          Length = 1148

 Score = 57.8 bits (138), Expect(2) = 9e-14
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = +2

Query: 65  CVDYTKGKQSKHTKKIATRNIDPSEIIYIDICGHFDVPFFCGEKY 199
           CVD  KGKQ+KHTKK A R  +  EII+ DICG   VP F GEKY
Sbjct: 467 CVDCIKGKQTKHTKKGAIRTNELLEIIHTDICGPLSVPCFTGEKY 511



 Score = 43.5 bits (101), Expect(2) = 9e-14
 Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = +1

Query: 181 FLRRKIFITFIDDFSCYCCLHLLHDKSQSVNVVEYS*LRL-KEIDKNVK 324
           F   K FITFIDD S Y  ++L+H+KSQ++++ E   + + +++DK +K
Sbjct: 506 FTGEKYFITFIDDLSRYGYVYLMHEKSQAIDIFEMFIIEVERQLDKKIK 554


>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score = 58.2 bits (139), Expect(2) = 2e-13
 Identities = 27/45 (60%), Positives = 33/45 (73%)
 Frame = +2

Query: 65  CVDYTKGKQSKHTKKIATRNIDPSEIIYIDICGHFDVPFFCGEKY 199
           CV+  KGKQ+KHTKK ATR+ +  EII+ DICG   +P F GEKY
Sbjct: 839 CVNCIKGKQTKHTKKGATRSNELLEIIHTDICGPLSIPCFTGEKY 883



 Score = 42.4 bits (98), Expect(2) = 2e-13
 Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +1

Query: 181  FLRRKIFITFIDDFSCYCCLHLLHDKSQSVNVVEYS*LRL-KEIDKNVK 324
            F   K FITFIDD S Y  ++L+H+KSQ++++ E     + +++DK +K
Sbjct: 878  FTGEKYFITFIDDLSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKKIK 926


>emb|CAN81845.1| hypothetical protein VITISV_037891 [Vitis vinifera]
          Length = 802

 Score = 48.5 bits (114), Expect(2) = 1e-10
 Identities = 23/39 (58%), Positives = 27/39 (69%)
 Frame = +2

Query: 83  GKQSKHTKKIATRNIDPSEIIYIDICGHFDVPFFCGEKY 199
           GKQ+KHTKK   R+ +  EII+ DICG   VP F GEKY
Sbjct: 193 GKQTKHTKKGVIRSNELLEIIHTDICGPLSVPCFTGEKY 231



 Score = 42.4 bits (98), Expect(2) = 1e-10
 Identities = 20/49 (40%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
 Frame = +1

Query: 181 FLRRKIFITFIDDFSCYCCLHLLHDKSQSVNVVEYS*LRL-KEIDKNVK 324
           F   K FI FIDD S Y  ++L+H+KSQ++++ E     + +++DKN+K
Sbjct: 226 FTGEKYFIIFIDDLSRYGYVYLMHEKSQAIDIFEMFITEVERQLDKNIK 274


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