BLASTX nr result

ID: Coptis24_contig00037001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037001
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17901.3| unnamed protein product [Vitis vinifera]              132   4e-29
emb|CBI17900.3| unnamed protein product [Vitis vinifera]              129   4e-28
ref|XP_002263288.1| PREDICTED: disease resistance protein At4g27...   129   4e-28
emb|CAN77367.1| hypothetical protein VITISV_010740 [Vitis vinifera]   129   4e-28
ref|XP_002278428.2| PREDICTED: disease resistance protein At4g27...   125   5e-27

>emb|CBI17901.3| unnamed protein product [Vitis vinifera]
          Length = 1063

 Score =  132 bits (333), Expect = 4e-29
 Identities = 85/211 (40%), Positives = 121/211 (57%), Gaps = 7/211 (3%)
 Frame = +2

Query: 2    DTPGFIVRAGIGLKLWPGHLENIHNCRRMSLMMNDIIQLPEQFECPQLLTLSLRGNRRLQ 181
            D   F+V++G  LK+WP   ++      +SLM N+I +LP+   CP+L TL L+ N  +Q
Sbjct: 487  DNNAFMVQSGSALKVWPTK-DSYEAYTAISLMSNEIEELPDGLVCPKLQTLLLQNNNDIQ 545

Query: 182  KIPDRFFEGMRSLVTLDLSYTDIQSLPPSLSWLAKLRVLHLNECANLSDVSYIGKCKKLE 361
            +IPD FF    SL  LDL+  DI SLPPSL  L  LR L L+ C +++D+S +GK +KLE
Sbjct: 546  EIPDDFFGSFHSLRVLDLNGADIPSLPPSLGLLRSLRTLCLDCCQSITDISILGKLEKLE 605

Query: 362  ILELGCEFSITGFSLKLPIEIMGVANLKLLNL-YRGETENIPPNIISSFSGLEELHMLVN 538
            IL L        +   LP E+  +ANL++L+       ++IPP +ISS S LEE++M   
Sbjct: 606  ILSLR-----ESYIEDLPEELAQLANLRMLDFTMSNNIKSIPPKVISSLSRLEEMYM-QG 659

Query: 539  EFGD------GSSCASFAEVASLTCLISLRL 613
             F D      G+S  + A    LTCL  L +
Sbjct: 660  SFADWGLLLEGTSSGANAGFDELTCLHRLNI 690


>emb|CBI17900.3| unnamed protein product [Vitis vinifera]
          Length = 1042

 Score =  129 bits (325), Expect = 4e-28
 Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%)
 Frame = +2

Query: 14   FIVRAGIGLKLWPGHLENIHNCRRMSLMMNDIIQLPEQFECPQLLTLSLRGNRRLQKIPD 193
            F+V++G  LK WP   ++      +SLM N+I +LP+   CP+L TL L+ N  +Q+IPD
Sbjct: 491  FMVQSGSALKEWPTK-DSYEAYTAISLMSNEIEELPDGLVCPKLQTLLLQNNNDIQEIPD 549

Query: 194  RFFEGMRSLVTLDLSYTDIQSLPPSLSWLAKLRVLHLNECANLSDVSYIGKCKKLEILEL 373
             FF    SL  LDL+  DI SLPPSL  L  LR L L+ C +++D+S +GK +KLEIL L
Sbjct: 550  DFFGSFHSLRVLDLNGADIPSLPPSLGLLRSLRTLCLDCCQSITDISILGKLEKLEILSL 609

Query: 374  GCEFSITGFSLKLPIEIMGVANLKLLNL-YRGETENIPPNIISSFSGLEELHMLVNEFGD 550
                    +   LP E+  +ANL++L+       ++IPP +ISS S LEE++M    F D
Sbjct: 610  R-----ESYIEDLPEELAQLANLRMLDFTMSNNIKSIPPKVISSLSRLEEMYM-QGSFAD 663

Query: 551  ------GSSCASFAEVASLTCLISLRL 613
                  G+S  + A    LTCL  L +
Sbjct: 664  WGLLLEGTSSGANAGFDELTCLHRLNI 690


>ref|XP_002263288.1| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 1063

 Score =  129 bits (325), Expect = 4e-28
 Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%)
 Frame = +2

Query: 14   FIVRAGIGLKLWPGHLENIHNCRRMSLMMNDIIQLPEQFECPQLLTLSLRGNRRLQKIPD 193
            F+V++G  LK WP   ++      +SLM N+I +LP+   CP+L TL L+ N  +Q+IPD
Sbjct: 491  FMVQSGSALKEWPTK-DSYEAYTAISLMSNEIEELPDGLVCPKLQTLLLQNNNDIQEIPD 549

Query: 194  RFFEGMRSLVTLDLSYTDIQSLPPSLSWLAKLRVLHLNECANLSDVSYIGKCKKLEILEL 373
             FF    SL  LDL+  DI SLPPSL  L  LR L L+ C +++D+S +GK +KLEIL L
Sbjct: 550  DFFGSFHSLRVLDLNGADIPSLPPSLGLLRSLRTLCLDCCQSITDISILGKLEKLEILSL 609

Query: 374  GCEFSITGFSLKLPIEIMGVANLKLLNL-YRGETENIPPNIISSFSGLEELHMLVNEFGD 550
                    +   LP E+  +ANL++L+       ++IPP +ISS S LEE++M    F D
Sbjct: 610  R-----ESYIEDLPEELAQLANLRMLDFTMSNNIKSIPPKVISSLSRLEEMYM-QGSFAD 663

Query: 551  ------GSSCASFAEVASLTCLISLRL 613
                  G+S  + A    LTCL  L +
Sbjct: 664  WGLLLEGTSSGANAGFDELTCLHRLNI 690


>emb|CAN77367.1| hypothetical protein VITISV_010740 [Vitis vinifera]
          Length = 975

 Score =  129 bits (325), Expect = 4e-28
 Identities = 84/207 (40%), Positives = 119/207 (57%), Gaps = 7/207 (3%)
 Frame = +2

Query: 14  FIVRAGIGLKLWPGHLENIHNCRRMSLMMNDIIQLPEQFECPQLLTLSLRGNRRLQKIPD 193
           F+V++G  LK WP   ++      +SLM N+I +LP+   CP+L TL L+ N  +Q+IPD
Sbjct: 400 FMVQSGSALKEWPTK-DSYEAYTAISLMSNEIEELPDGLVCPKLQTLLLQNNNDIQEIPD 458

Query: 194 RFFEGMRSLVTLDLSYTDIQSLPPSLSWLAKLRVLHLNECANLSDVSYIGKCKKLEILEL 373
            FF    SL  LDL+  DI SLPPSL  L  LR L L+ C +++D+S +GK +KLEIL L
Sbjct: 459 DFFGSFHSLRVLDLNGADIPSLPPSLGLLRSLRTLCLDCCQSITDISILGKLEKLEILSL 518

Query: 374 GCEFSITGFSLKLPIEIMGVANLKLLNL-YRGETENIPPNIISSFSGLEELHMLVNEFGD 550
                   +   LP E+  +ANL++L+       ++IPP +ISS S LEE++M    F D
Sbjct: 519 R-----ESYIEDLPEELAQLANLRMLDFTMSNNIKSIPPKVISSLSRLEEMYM-QGSFAD 572

Query: 551 ------GSSCASFAEVASLTCLISLRL 613
                 G+S  + A    LTCL  L +
Sbjct: 573 WGLLLEGTSSGANAGFDELTCLHRLNI 599


>ref|XP_002278428.2| PREDICTED: disease resistance protein At4g27190-like [Vitis vinifera]
          Length = 1144

 Score =  125 bits (315), Expect = 5e-27
 Identities = 92/222 (41%), Positives = 121/222 (54%), Gaps = 17/222 (7%)
 Frame = +2

Query: 14   FIVRAGIGLKLWPGHLENIHNCRRMSLMMNDIIQLPEQFECPQLLTLSLRGNRRLQKIPD 193
            F+V+AG+GLK WP       +   +SLM N+I  LP   ECP+L TL L GNR L+  PD
Sbjct: 486  FMVKAGVGLKNWPKK-GTFEHYALISLMANNISSLPVGLECPKLHTLLLGGNRGLKIFPD 544

Query: 194  RFFEGMRSLVTLDLSYTD---------IQSLPPSLSWLAKLRVLHLNECANLSDVSYIGK 346
             FF GM++L  LDL+            I  LP SL  L  LR+LHL+    L D+S +GK
Sbjct: 545  AFFVGMKTLKVLDLTAISKKLYRYSLHITPLPASLQLLTDLRMLHLHH-RKLGDISILGK 603

Query: 347  CKKLEILELGCEFSITGFSLKLPIEIMGVANLKLLNL-YRGETENIPPNIISSFSGLEEL 523
             KKLEIL             +LP E+  + NLKLL+L Y    + IPPN+IS  S LEEL
Sbjct: 604  LKKLEILSF-----FASHISELPKEMGELKNLKLLDLTYCRSLKKIPPNLISGLSALEEL 658

Query: 524  HM--LVNEFGDGS-----SCASFAEVASLTCLISLRLRVQNA 628
            +M     ++  G      S AS +E+ SL  L +L + + NA
Sbjct: 659  YMRGSFQQWDVGGTTIERSSASLSELNSLLNLTTLHVEIINA 700


Top