BLASTX nr result

ID: Coptis24_contig00037000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00037000
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514555.1| menaquinone biosynthesis protein, putative [...    57   1e-06

>ref|XP_002514555.1| menaquinone biosynthesis protein, putative [Ricinus communis]
           gi|223546159|gb|EEF47661.1| menaquinone biosynthesis
           protein, putative [Ricinus communis]
          Length = 1679

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
 Frame = -3

Query: 281 LNLPNNKKRIQHSPKSRPIYLHSHFLPFRKHTSNFKLIIR-----GMSSSVDNVESINDD 117
           LNL    K+ +HSP    +   +   PFR +  N K+I+      G     D +E+  D 
Sbjct: 18  LNLQFRVKKSRHSPSF--LAFLNRTAPFRFNLLNSKVIMEAVRYDGPIIDFDELEADKDC 75

Query: 116 LSPVEICYTRTLPPALTLEHGFVKIEEEVDKLISNPP 6
              +E C TRTL PALTLEHG   ++E V++L  NPP
Sbjct: 76  EVVIETCITRTLTPALTLEHGLRSVKEAVEELKLNPP 112


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