BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036954
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95223.1| retrotransposon protein, putative, Ty3-gypsy subc...   163   1e-38
emb|CAE05388.1| OSJNBa0022F16.12 [Oryza sativa Japonica Group]        163   2e-38
gb|ABA98194.1| retrotransposon protein, putative, Ty3-gypsy subc...   162   2e-38
gb|ABA96234.2| retrotransposon protein, putative, Ty3-gypsy subc...   162   3e-38
gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]     162   3e-38

>gb|ABA95223.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1874

 Score =  163 bits (413), Expect = 1e-38
 Identities = 69/100 (69%), Positives = 90/100 (90%)
 Frame = +3

Query: 3    AFQELKTRLITAPVLTIPDPEKSYVIYTDASNTGLGCVLMQEGQVIAYASRQLNAHEKNY 182
            +FQELK RL++AP+LT+PDP+K + +Y DAS  GLGCVLMQ+G+V+AYASRQL  HEKNY
Sbjct: 1210 SFQELKNRLVSAPILTLPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNY 1269

Query: 183  PTHDLELAAIIHALKIWRHYVYGEKFEIFSDHKSLKYLFS 302
            PTHDLELAA++HALKIWRHY++G + E+++DHKSLKY+F+
Sbjct: 1270 PTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFT 1309


>emb|CAE05388.1| OSJNBa0022F16.12 [Oryza sativa Japonica Group]
          Length = 1138

 Score =  163 bits (412), Expect = 2e-38
 Identities = 70/100 (70%), Positives = 89/100 (89%)
 Frame = +3

Query: 3   AFQELKTRLITAPVLTIPDPEKSYVIYTDASNTGLGCVLMQEGQVIAYASRQLNAHEKNY 182
           +FQELK RLITAP+L +PDP+K + +Y DAS  GLGCVLMQ+G+V+AYASRQL  HEKNY
Sbjct: 474 SFQELKNRLITAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNY 533

Query: 183 PTHDLELAAIIHALKIWRHYVYGEKFEIFSDHKSLKYLFS 302
           PTHDLELAA++HALKIWRHY++G + E+++DHKSLKY+F+
Sbjct: 534 PTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFT 573


>gb|ABA98194.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1375

 Score =  162 bits (411), Expect = 2e-38
 Identities = 68/100 (68%), Positives = 90/100 (90%)
 Frame = +3

Query: 3    AFQELKTRLITAPVLTIPDPEKSYVIYTDASNTGLGCVLMQEGQVIAYASRQLNAHEKNY 182
            +FQELK RL++AP+LT+PDP+K + +Y DAS  GLGCVLMQ+G+V+AYASRQL  HEKNY
Sbjct: 711  SFQELKNRLVSAPILTLPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNY 770

Query: 183  PTHDLELAAIIHALKIWRHYVYGEKFEIFSDHKSLKYLFS 302
            PTHD+ELAA++HALKIWRHY++G + E+++DHKSLKY+F+
Sbjct: 771  PTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFT 810


>gb|ABA96234.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1407

 Score =  162 bits (409), Expect = 3e-38
 Identities = 69/100 (69%), Positives = 90/100 (90%)
 Frame = +3

Query: 3    AFQELKTRLITAPVLTIPDPEKSYVIYTDASNTGLGCVLMQEGQVIAYASRQLNAHEKNY 182
            +FQELK+RLI+AP+L +PDP+K + +Y DAS  GLGCVLMQ+G+V+AYASRQL  HEKNY
Sbjct: 743  SFQELKSRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQDGKVVAYASRQLRPHEKNY 802

Query: 183  PTHDLELAAIIHALKIWRHYVYGEKFEIFSDHKSLKYLFS 302
            PTHDLELAA++HALKIWRHY++G + E+++DHKSLKY+F+
Sbjct: 803  PTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFT 842


>gb|AAS98511.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1678

 Score =  162 bits (409), Expect = 3e-38
 Identities = 69/100 (69%), Positives = 90/100 (90%)
 Frame = +3

Query: 3    AFQELKTRLITAPVLTIPDPEKSYVIYTDASNTGLGCVLMQEGQVIAYASRQLNAHEKNY 182
            +FQELK+RLI+AP+L +PDP+K + +Y DAS  GLGCVLMQEG+V+AYASRQL  HEKNY
Sbjct: 1014 SFQELKSRLISAPILILPDPKKGFQVYCDASKFGLGCVLMQEGKVVAYASRQLRPHEKNY 1073

Query: 183  PTHDLELAAIIHALKIWRHYVYGEKFEIFSDHKSLKYLFS 302
            PTHD+ELAA++HALKIWRHY++G + E+++DHKSLKY+F+
Sbjct: 1074 PTHDIELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFT 1113