BLASTX nr result

ID: Coptis24_contig00036950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036950
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143531.1| PREDICTED: uncharacterized protein LOC101204...   115   5e-24
ref|XP_002310322.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_004160946.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   111   7e-23
ref|XP_002531995.1| conserved hypothetical protein [Ricinus comm...   110   9e-23
ref|XP_001783849.1| predicted protein [Physcomitrella patens sub...    95   5e-18

>ref|XP_004143531.1| PREDICTED: uncharacterized protein LOC101204059 [Cucumis sativus]
          Length = 365

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/82 (64%), Positives = 63/82 (76%)
 Frame = -3

Query: 291 FINWRSSSMQQLEILVNLPILGISKDVSKGNFWCESWGHEPDDRNEAVMLAKRLLSNAPV 112
           F NWRSSS QQL IL+NLP   + K++S+  FWC+SWG +PDD N+AV LAK+ L  APV
Sbjct: 76  FPNWRSSSTQQLHILINLPKFCLLKEISQRKFWCQSWGAQPDDTNDAVALAKQFLDRAPV 135

Query: 111 LVPIYKYCYICSVPNLAGNPVF 46
           LVPIYK  YI S PN+AGNPVF
Sbjct: 136 LVPIYKNWYIPSAPNMAGNPVF 157


>ref|XP_002310322.1| predicted protein [Populus trichocarpa] gi|222853225|gb|EEE90772.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/82 (62%), Positives = 64/82 (78%)
 Frame = -3

Query: 291 FINWRSSSMQQLEILVNLPILGISKDVSKGNFWCESWGHEPDDRNEAVMLAKRLLSNAPV 112
           F NWRSSS+QQL+IL+NLP L + K++S  NFW +SWGH P D N+A+  AK+ L  APV
Sbjct: 71  FPNWRSSSLQQLQILLNLPSLNLCKNISLNNFWVDSWGHRPQDTNKALDFAKQFLDKAPV 130

Query: 111 LVPIYKYCYICSVPNLAGNPVF 46
           LVPIY+ CYI S PN++GNPVF
Sbjct: 131 LVPIYRNCYIPSSPNVSGNPVF 152


>ref|XP_004160946.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229907 [Cucumis sativus]
          Length = 259

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/82 (64%), Positives = 63/82 (76%)
 Frame = -3

Query: 291 FINWRSSSMQQLEILVNLPILGISKDVSKGNFWCESWGHEPDDRNEAVMLAKRLLSNAPV 112
           F NWRSSS QQL IL+NLP   + K++S+  FWC+SWG +PDD N+AV LAK+ L  APV
Sbjct: 76  FPNWRSSSTQQLHILINLPNC-LLKEISQRKFWCQSWGAQPDDTNDAVALAKQFLDRAPV 134

Query: 111 LVPIYKYCYICSVPNLAGNPVF 46
           LVPIYK  YI S PN+AGNPVF
Sbjct: 135 LVPIYKNWYIPSAPNMAGNPVF 156


>ref|XP_002531995.1| conserved hypothetical protein [Ricinus communis]
           gi|223528354|gb|EEF30394.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 374

 Score =  110 bits (276), Expect = 9e-23
 Identities = 49/82 (59%), Positives = 62/82 (75%)
 Frame = -3

Query: 291 FINWRSSSMQQLEILVNLPILGISKDVSKGNFWCESWGHEPDDRNEAVMLAKRLLSNAPV 112
           F NWRSSS QQL++L+NLP L +SK+++  NFW +SWG+ PDD  + +  +KRL + APV
Sbjct: 74  FPNWRSSSPQQLQLLLNLPFLNLSKNITHNNFWVDSWGYRPDDSQQMLATSKRLFTKAPV 133

Query: 111 LVPIYKYCYICSVPNLAGNPVF 46
           LVPIY  CYI S PN AGNPVF
Sbjct: 134 LVPIYGNCYIPSSPNTAGNPVF 155


>ref|XP_001783849.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162664627|gb|EDQ51339.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 395

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 38/82 (46%), Positives = 59/82 (71%)
 Frame = -3

Query: 291 FINWRSSSMQQLEILVNLPILGISKDVSKGNFWCESWGHEPDDRNEAVMLAKRLLSNAPV 112
           F NWR+ +   L + +NLP++G+ ++V+  +FW ++WG  P D N+AV +A+  +  +P+
Sbjct: 109 FPNWRAGNRDHLSMRINLPVVGLLREVANSSFWWKAWGPRPKDINQAVRIARSAIRKSPI 168

Query: 111 LVPIYKYCYICSVPNLAGNPVF 46
           LVP+Y +CYI S PNLAGNPVF
Sbjct: 169 LVPMYGHCYIPSSPNLAGNPVF 190


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