BLASTX nr result

ID: Coptis24_contig00036945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036945
         (384 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592510.1| Protein argonaute 4A [Medicago truncatula] g...    77   8e-17
ref|XP_003617095.1| Protein argonaute 4 [Medicago truncatula] gi...    79   1e-16
ref|XP_003617098.1| Protein argonaute 4A [Medicago truncatula] g...    79   1e-16
ref|XP_003617096.1| Protein argonaute 4 [Medicago truncatula] gi...    79   1e-16
ref|XP_003617094.1| Protein argonaute 4 [Medicago truncatula] gi...    79   1e-16

>ref|XP_003592510.1| Protein argonaute 4A [Medicago truncatula]
           gi|355481558|gb|AES62761.1| Protein argonaute 4A
           [Medicago truncatula]
          Length = 902

 Score = 77.4 bits (189), Expect(2) = 8e-17
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +1

Query: 139 GTSRPVHYHVLLDEIGFSTDELQELVHTLSYVYQRSSTAVSV 264
           GT+RP HYHVLLDEIGFS DELQE VH+LSYVYQRS+TAVSV
Sbjct: 805 GTTRPTHYHVLLDEIGFSPDELQEFVHSLSYVYQRSTTAVSV 846



 Score = 34.3 bits (77), Expect(2) = 8e-17
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +2

Query: 281 VAPICYAHLAAAQVALF 331
           VAPICYAHLAA+QVA F
Sbjct: 847 VAPICYAHLAASQVAQF 863



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 25/44 (56%), Positives = 35/44 (79%)
 Frame = +2

Query: 8   MLRSREWPLVSRYRASIRAQSPKVEMIDSLFTPISESKDEGIIR 139
           ++ SR+WPL+S+YRA +R Q  KVEMID+LF P+  ++D GIIR
Sbjct: 656 VVSSRQWPLISKYRACVRTQGSKVEMIDNLFKPMPNNEDAGIIR 699


>ref|XP_003617095.1| Protein argonaute 4 [Medicago truncatula]
           gi|355518430|gb|AET00054.1| Protein argonaute 4
           [Medicago truncatula]
          Length = 948

 Score = 78.6 bits (192), Expect(2) = 1e-16
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +1

Query: 139 GTSRPVHYHVLLDEIGFSTDELQELVHTLSYVYQRSSTAVSV 264
           GTSRP HYHVLLDEIGFS D+LQELVH+LSYVYQRS+TA+SV
Sbjct: 848 GTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISV 889



 Score = 32.7 bits (73), Expect(2) = 1e-16
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 281 VAPICYAHLAAAQVALF 331
           VAPICYAHLAA+QV  F
Sbjct: 890 VAPICYAHLAASQVGQF 906



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/44 (61%), Positives = 38/44 (86%)
 Frame = +2

Query: 8   MLRSREWPLVSRYRASIRAQSPKVEMIDSLFTPISESKDEGIIR 139
           ++ SR+WPL+S+YRA +R Q  KVEMID+LF P+S+++DEGIIR
Sbjct: 699 VVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEGIIR 742


>ref|XP_003617098.1| Protein argonaute 4A [Medicago truncatula]
           gi|355518433|gb|AET00057.1| Protein argonaute 4A
           [Medicago truncatula]
          Length = 929

 Score = 78.6 bits (192), Expect(2) = 1e-16
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +1

Query: 139 GTSRPVHYHVLLDEIGFSTDELQELVHTLSYVYQRSSTAVSV 264
           GTSRP HYHVLLDEIGFS D+LQELVH+LSYVYQRS+TA+SV
Sbjct: 833 GTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISV 874



 Score = 32.7 bits (73), Expect(2) = 1e-16
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 281 VAPICYAHLAAAQVALF 331
           VAPICYAHLAA+QV  F
Sbjct: 875 VAPICYAHLAASQVGQF 891



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/44 (61%), Positives = 37/44 (84%)
 Frame = +2

Query: 8   MLRSREWPLVSRYRASIRAQSPKVEMIDSLFTPISESKDEGIIR 139
           ++ SR+WPL+S+YRA +R Q  KVEMID+LF P+S+ +DEGIIR
Sbjct: 684 VVSSRKWPLISKYRACVRTQGSKVEMIDNLFKPVSDKEDEGIIR 727


>ref|XP_003617096.1| Protein argonaute 4 [Medicago truncatula]
           gi|355518431|gb|AET00055.1| Protein argonaute 4
           [Medicago truncatula]
          Length = 926

 Score = 78.6 bits (192), Expect(2) = 1e-16
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +1

Query: 139 GTSRPVHYHVLLDEIGFSTDELQELVHTLSYVYQRSSTAVSV 264
           GTSRP HYHVLLDEIGFS D+LQELVH+LSYVYQRS+TA+SV
Sbjct: 826 GTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISV 867



 Score = 32.7 bits (73), Expect(2) = 1e-16
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 281 VAPICYAHLAAAQVALF 331
           VAPICYAHLAA+QV  F
Sbjct: 868 VAPICYAHLAASQVGQF 884



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/49 (57%), Positives = 40/49 (81%)
 Frame = +2

Query: 8   MLRSREWPLVSRYRASIRAQSPKVEMIDSLFTPISESKDEGIIRGQVGQ 154
           ++ SR+WPL+S+YRA +R Q  KVEMID+LF P+S+++DEGIIR  V +
Sbjct: 699 VVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEGIIRDGVSE 747


>ref|XP_003617094.1| Protein argonaute 4 [Medicago truncatula]
           gi|355518429|gb|AET00053.1| Protein argonaute 4
           [Medicago truncatula]
          Length = 908

 Score = 78.6 bits (192), Expect(2) = 1e-16
 Identities = 36/42 (85%), Positives = 40/42 (95%)
 Frame = +1

Query: 139 GTSRPVHYHVLLDEIGFSTDELQELVHTLSYVYQRSSTAVSV 264
           GTSRP HYHVLLDEIGFS D+LQELVH+LSYVYQRS+TA+SV
Sbjct: 808 GTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISV 849



 Score = 32.7 bits (73), Expect(2) = 1e-16
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +2

Query: 281 VAPICYAHLAAAQVALF 331
           VAPICYAHLAA+QV  F
Sbjct: 850 VAPICYAHLAASQVGQF 866



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 27/44 (61%), Positives = 38/44 (86%)
 Frame = +2

Query: 8   MLRSREWPLVSRYRASIRAQSPKVEMIDSLFTPISESKDEGIIR 139
           ++ SR+WPL+S+YRA +R Q  KVEMID+LF P+S+++DEGIIR
Sbjct: 659 VVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDTEDEGIIR 702


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