BLASTX nr result

ID: Coptis24_contig00036937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036937
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336294.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
ref|XP_002526965.1| conserved hypothetical protein [Ricinus comm...   152   3e-35
ref|XP_002515051.1| conserved hypothetical protein [Ricinus comm...   150   1e-34
ref|XP_002339273.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_002526964.1| conserved hypothetical protein [Ricinus comm...   149   3e-34

>ref|XP_002336294.1| predicted protein [Populus trichocarpa] gi|222834226|gb|EEE72703.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  154 bits (389), Expect = 7e-36
 Identities = 74/115 (64%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 WIRKFTLTARKVSRATWTPLELLYVGKSNPSEKVRRNNETIADEKLSHYWSDLTLIWFFW 163
           WIRKFT TA+ V++     LE+LYVGKSNP EK R+ N  I +E LSH   DLTLIWFFW
Sbjct: 128 WIRKFTATAKAVAKDARIQLEMLYVGKSNPKEKARKINGVIVNENLSHVLPDLTLIWFFW 187

Query: 162 VRIESMWYSKMQQGKTADNDPLMQELVKMLSYDVSGKGWAIISKG-PEMATAKGD 1
           VR+ESMW+SK+Q  +TADNDP+MQE++ MLS+D S +GWA+ISKG  EMA AKGD
Sbjct: 188 VRLESMWHSKVQHQRTADNDPIMQEIMTMLSFDGSDQGWAVISKGSDEMAKAKGD 242


>ref|XP_002526965.1| conserved hypothetical protein [Ricinus communis]
           gi|223533717|gb|EEF35452.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score =  152 bits (384), Expect = 3e-35
 Identities = 74/114 (64%), Positives = 88/114 (77%), Gaps = 1/114 (0%)
 Frame = -2

Query: 342 WIRKFTLTARKVSRATWTPLELLYVGKSNPSEKVRRNNETIADEKLSHYWSDLTLIWFFW 163
           WIRKFT TAR V++A   PL ++YVGKSNP E+VRRN  TI  EKLSHYW DLT IW+FW
Sbjct: 621 WIRKFTSTARAVAQAAGIPLGMVYVGKSNPKERVRRNVSTIMVEKLSHYWQDLTSIWYFW 680

Query: 162 VRIESMWYSKMQQGKTADNDPLMQELVKMLSYDVSGKGWAIISKG-PEMATAKG 4
           VRIESMW SK Q GKT++ND LM+E++ MLS+D S  GWAI +KG  E+  AKG
Sbjct: 681 VRIESMWRSKNQLGKTSENDSLMKEIMAMLSFDSSEGGWAIFTKGTEELVKAKG 734


>ref|XP_002515051.1| conserved hypothetical protein [Ricinus communis]
           gi|223546102|gb|EEF47605.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 701

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/118 (61%), Positives = 91/118 (77%), Gaps = 5/118 (4%)
 Frame = -2

Query: 342 WIRKFTLTARKVSRATWTPLELLYVGKSNPSEKVRRNNETIADEKLSHYWSDLTLIWFFW 163
           WIRKFT+TA  +++A    LE+LYVGKSNP EKVR+NN  I +EKLSH   DLTLIWFFW
Sbjct: 509 WIRKFTMTANALAQAAGIDLEMLYVGKSNPREKVRKNNIIIQNEKLSHVLQDLTLIWFFW 568

Query: 162 VRIESMWYSKMQQGKTADNDPLMQELVKMLSYDVSGKGWAIISKGP-----EMATAKG 4
           VR+ESMW+SK+Q  +T +ND +MQE+V MLS+D S +GWA+ISKG      ++A AKG
Sbjct: 569 VRLESMWHSKVQHNRTVENDIIMQEIVTMLSFDGSDQGWAVISKGSGAENRQLAKAKG 626


>ref|XP_002339273.1| predicted protein [Populus trichocarpa] gi|222874794|gb|EEF11925.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  149 bits (377), Expect = 2e-34
 Identities = 71/115 (61%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 WIRKFTLTARKVSRATWTPLELLYVGKSNPSEKVRRNNETIADEKLSHYWSDLTLIWFFW 163
           WIRKFT TA++V+      LE+LYVGK NP EKVR NN  I +EKLSH   DLTLIWFFW
Sbjct: 17  WIRKFTATAKEVASKAAITLEMLYVGKCNPREKVRENNVIIKNEKLSHVLPDLTLIWFFW 76

Query: 162 VRIESMWYSKMQQGKTADNDPLMQELVKMLSYDVSGKGWAIISKGP-EMATAKGD 1
           VR+ESMW+SK+Q  +T +ND +MQE++ MLS+D S +GWA+IS+GP +MA AKG+
Sbjct: 77  VRLESMWHSKVQLKRTVENDAIMQEIMTMLSFDGSDQGWAVISRGPADMAKAKGE 131


>ref|XP_002526964.1| conserved hypothetical protein [Ricinus communis]
           gi|223533716|gb|EEF35451.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 805

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/114 (64%), Positives = 87/114 (76%), Gaps = 1/114 (0%)
 Frame = -2

Query: 342 WIRKFTLTARKVSRATWTPLELLYVGKSNPSEKVRRNNETIADEKLSHYWSDLTLIWFFW 163
           WIRKFT TAR V++A   PL ++YVGKSNP E+VRRN  TI  EKLSHYW DLT IW+FW
Sbjct: 617 WIRKFTSTARAVAQAAGIPLGMVYVGKSNPKERVRRNIATIMVEKLSHYWQDLTSIWYFW 676

Query: 162 VRIESMWYSKMQQGKTADNDPLMQELVKMLSYDVSGKGWAIISKG-PEMATAKG 4
           VRIESMW SK Q GKT++ND LM+E++ MLS+D S  GWAI + G  E+  AKG
Sbjct: 677 VRIESMWRSKNQLGKTSENDSLMKEIMAMLSFDSSEGGWAIFTGGTDEIVKAKG 730


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