BLASTX nr result

ID: Coptis24_contig00036921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036921
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]   108   4e-27
emb|CAN69408.1| hypothetical protein VITISV_014748 [Vitis vinifera]   114   6e-24
emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]   114   1e-23
emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]   114   1e-23
emb|CBI20118.3| unnamed protein product [Vitis vinifera]              111   5e-23

>emb|CAN62870.1| hypothetical protein VITISV_015928 [Vitis vinifera]
          Length = 764

 Score =  108 bits (271), Expect(2) = 4e-27
 Identities = 49/65 (75%), Positives = 53/65 (81%)
 Frame = -2

Query: 196 CVDCINGKQTKHTKKGAIRSTHLLEIIHTDICGPFDVPSFSSEKYFITFVDDFSRYYYLY 17
           C  CI GKQ KHTKKGA RS  LLEI+HTDICG FD  SFS EKYFITF+DDFSRY Y+Y
Sbjct: 365 CAYCIKGKQIKHTKKGATRSRELLEIVHTDICGSFDSSSFSKEKYFITFIDDFSRYCYIY 424

Query: 16  LLHDK 2
           LLH+K
Sbjct: 425 LLHEK 429



 Score = 37.4 bits (85), Expect(2) = 4e-27
 Identities = 16/26 (61%), Positives = 21/26 (80%)
 Frame = -3

Query: 270 HISRERFKRLVKEKVLSNLNFTDFGV 193
           HIS+ER KRLVK+++L N +FTD  V
Sbjct: 339 HISKERMKRLVKDEILPNEDFTDLNV 364


>emb|CAN69408.1| hypothetical protein VITISV_014748 [Vitis vinifera]
          Length = 1148

 Score =  114 bits (286), Expect = 6e-24
 Identities = 50/65 (76%), Positives = 56/65 (86%)
 Frame = -2

Query: 196 CVDCINGKQTKHTKKGAIRSTHLLEIIHTDICGPFDVPSFSSEKYFITFVDDFSRYYYLY 17
           CVDCI GKQTKHTKKGAIR+  LLEIIHTDICGP  VP F+ EKYFITF+DD SRY Y+Y
Sbjct: 467 CVDCIKGKQTKHTKKGAIRTNELLEIIHTDICGPLSVPCFTGEKYFITFIDDLSRYGYVY 526

Query: 16  LLHDK 2
           L+H+K
Sbjct: 527 LMHEK 531


>emb|CAN68020.1| hypothetical protein VITISV_003621 [Vitis vinifera]
          Length = 1180

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/65 (76%), Positives = 55/65 (84%)
 Frame = -2

Query: 196 CVDCINGKQTKHTKKGAIRSTHLLEIIHTDICGPFDVPSFSSEKYFITFVDDFSRYYYLY 17
           CVDCI GKQTKHTKKGA RS  LLEIIHTDICGP  VP F+ EKYFITF+DD SRY Y+Y
Sbjct: 441 CVDCIKGKQTKHTKKGATRSNELLEIIHTDICGPLSVPCFTGEKYFITFIDDLSRYGYVY 500

Query: 16  LLHDK 2
           L+H+K
Sbjct: 501 LMHEK 505


>emb|CAN69396.1| hypothetical protein VITISV_021034 [Vitis vinifera]
          Length = 2026

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/65 (76%), Positives = 55/65 (84%)
 Frame = -2

Query: 196 CVDCINGKQTKHTKKGAIRSTHLLEIIHTDICGPFDVPSFSSEKYFITFVDDFSRYYYLY 17
           CVDCI GKQTKHTKKGA RS  LLEIIHTDICGP  VP F+ EKYFITF+DD SRY Y+Y
Sbjct: 283 CVDCIKGKQTKHTKKGATRSNELLEIIHTDICGPLSVPCFTGEKYFITFIDDLSRYGYVY 342

Query: 16  LLHDK 2
           L+H+K
Sbjct: 343 LMHEK 347


>emb|CBI20118.3| unnamed protein product [Vitis vinifera]
          Length = 1354

 Score =  111 bits (278), Expect = 5e-23
 Identities = 48/65 (73%), Positives = 55/65 (84%)
 Frame = -2

Query: 196  CVDCINGKQTKHTKKGAIRSTHLLEIIHTDICGPFDVPSFSSEKYFITFVDDFSRYYYLY 17
            CV+CI GKQTKHTKKGA RS  LLEIIHTDICGP  +P F+ EKYFITF+DD SRY Y+Y
Sbjct: 839  CVNCIKGKQTKHTKKGATRSNELLEIIHTDICGPLSIPCFTGEKYFITFIDDLSRYGYVY 898

Query: 16   LLHDK 2
            L+H+K
Sbjct: 899  LMHEK 903


Top