BLASTX nr result

ID: Coptis24_contig00036902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036902
         (179 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534066.1| conserved hypothetical protein [Ricinus comm...    68   7e-10
ref|XP_002307551.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003545186.1| PREDICTED: uncharacterized protein LOC100790...    62   5e-08
ref|XP_003519544.1| PREDICTED: uncharacterized protein LOC100777...    62   6e-08
gb|ACU23253.1| unknown [Glycine max]                                   62   6e-08

>ref|XP_002534066.1| conserved hypothetical protein [Ricinus communis]
           gi|223525893|gb|EEF28310.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 283

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/59 (61%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
 Frame = +2

Query: 2   PPRTKTIFISANMK-NMEQLRTQLLQLHTEAEKTRDKASNTRLRFMRLSEAAEKLQRQA 175
           P   + + +++N K N EQLRTQL QLH E++ TR KA++ RLRFMRLSEAAEKL+RQA
Sbjct: 14  PSALRPVCLASNTKINTEQLRTQLDQLHVESDTTRAKANSARLRFMRLSEAAEKLKRQA 72


>ref|XP_002307551.1| predicted protein [Populus trichocarpa] gi|222857000|gb|EEE94547.1|
           predicted protein [Populus trichocarpa]
          Length = 268

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = +2

Query: 44  NMEQLRTQLLQLHTEAEKTRDKASNTRLRFMRLSEAAEKLQRQA 175
           N +QLRTQL QLH EAE TR KA++ RLR MRLSEAAEKL+RQA
Sbjct: 28  NTDQLRTQLDQLHAEAESTRAKANSARLRLMRLSEAAEKLKRQA 71


>ref|XP_003545186.1| PREDICTED: uncharacterized protein LOC100790457 [Glycine max]
          Length = 296

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 31/49 (63%), Positives = 39/49 (79%)
 Frame = +2

Query: 29  SANMKNMEQLRTQLLQLHTEAEKTRDKASNTRLRFMRLSEAAEKLQRQA 175
           S +  N +QLR+QL  LH+EA+ TR KA+N RLRF+RLSE AEKLQ+QA
Sbjct: 33  SVSTINTDQLRSQLDHLHSEADATRAKATNARLRFLRLSEVAEKLQKQA 81


>ref|XP_003519544.1| PREDICTED: uncharacterized protein LOC100777386 [Glycine max]
          Length = 293

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/49 (63%), Positives = 39/49 (79%)
 Frame = +2

Query: 29  SANMKNMEQLRTQLLQLHTEAEKTRDKASNTRLRFMRLSEAAEKLQRQA 175
           S +  N +QLR+QL QLH EA+ TR KA+N RLR +RLSEAAEKL++QA
Sbjct: 31  SVSTINTDQLRSQLDQLHAEADATRTKATNARLRLLRLSEAAEKLKKQA 79


>gb|ACU23253.1| unknown [Glycine max]
          Length = 293

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/49 (63%), Positives = 39/49 (79%)
 Frame = +2

Query: 29  SANMKNMEQLRTQLLQLHTEAEKTRDKASNTRLRFMRLSEAAEKLQRQA 175
           S +  N +QLR+QL QLH EA+ TR KA+N RLR +RLSEAAEKL++QA
Sbjct: 31  SVSTINTDQLRSQLDQLHAEADATRTKATNARLRLLRLSEAAEKLKKQA 79


Top