BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036896
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   230   1e-58
emb|CBI20904.3| unnamed protein product [Vitis vinifera]              230   1e-58
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...   227   7e-58
ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycin...   223   1e-56
ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp....   216   2e-54

>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
            vinifera]
          Length = 2181

 Score =  230 bits (586), Expect = 1e-58
 Identities = 120/148 (81%), Positives = 128/148 (86%), Gaps = 1/148 (0%)
 Frame = -2

Query: 443  FLMRMAHGAPLRMSIKSRENKKGLHSRLSNQNFAIGSCTL-SDDSTLRVCKRFYVALILS 267
            FLMRMAHGAP+  S KSR N KGLH +  N+   I  C+L SD+ TLRVCKRFYVALILS
Sbjct: 1104 FLMRMAHGAPMCASNKSRNNGKGLHDKFDNR-LGITKCSLLSDEQTLRVCKRFYVALILS 1162

Query: 266  RLVQEAPVTDVCEAFKVARGMVQALQENAGRFASMVSLFCERLGWHDLEGLVGKFQNRVS 87
            +LVQE PVT+VCEAFKVARGMVQ LQENAGRFASMVSLFCERLGW+DLEGLV KFQNRVS
Sbjct: 1163 KLVQEVPVTEVCEAFKVARGMVQGLQENAGRFASMVSLFCERLGWNDLEGLVAKFQNRVS 1222

Query: 86   FGVRAEIVELTNIPYVKGSRARALCKAG 3
            FGVRAEIVELT IPYVKGSRARAL KAG
Sbjct: 1223 FGVRAEIVELTTIPYVKGSRARALYKAG 1250


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score =  230 bits (586), Expect = 1e-58
 Identities = 120/148 (81%), Positives = 128/148 (86%), Gaps = 1/148 (0%)
 Frame = -2

Query: 443  FLMRMAHGAPLRMSIKSRENKKGLHSRLSNQNFAIGSCTL-SDDSTLRVCKRFYVALILS 267
            FLMRMAHGAP+  S KSR N KGLH +  N+   I  C+L SD+ TLRVCKRFYVALILS
Sbjct: 1036 FLMRMAHGAPMCASNKSRNNGKGLHDKFDNR-LGITKCSLLSDEQTLRVCKRFYVALILS 1094

Query: 266  RLVQEAPVTDVCEAFKVARGMVQALQENAGRFASMVSLFCERLGWHDLEGLVGKFQNRVS 87
            +LVQE PVT+VCEAFKVARGMVQ LQENAGRFASMVSLFCERLGW+DLEGLV KFQNRVS
Sbjct: 1095 KLVQEVPVTEVCEAFKVARGMVQGLQENAGRFASMVSLFCERLGWNDLEGLVAKFQNRVS 1154

Query: 86   FGVRAEIVELTNIPYVKGSRARALCKAG 3
            FGVRAEIVELT IPYVKGSRARAL KAG
Sbjct: 1155 FGVRAEIVELTTIPYVKGSRARALYKAG 1182


>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
            gi|223544402|gb|EEF45923.1| DNA polymerase theta,
            putative [Ricinus communis]
          Length = 2154

 Score =  227 bits (579), Expect = 7e-58
 Identities = 114/147 (77%), Positives = 128/147 (87%)
 Frame = -2

Query: 443  FLMRMAHGAPLRMSIKSRENKKGLHSRLSNQNFAIGSCTLSDDSTLRVCKRFYVALILSR 264
            FLMRMAHGAP+RM  +S +N KGL  +L NQ+    +  +SD+ +LRVC+RFYVALILSR
Sbjct: 1084 FLMRMAHGAPMRMLNRSTDNMKGLPGKLENQHGKSKNSIISDEQSLRVCRRFYVALILSR 1143

Query: 263  LVQEAPVTDVCEAFKVARGMVQALQENAGRFASMVSLFCERLGWHDLEGLVGKFQNRVSF 84
            LVQE PV +VCEAFKVARGMVQALQEN+GRFASMVSLFCERLGWHD+EGLV KFQ+RVSF
Sbjct: 1144 LVQETPVAEVCEAFKVARGMVQALQENSGRFASMVSLFCERLGWHDVEGLVSKFQSRVSF 1203

Query: 83   GVRAEIVELTNIPYVKGSRARALCKAG 3
            GVRAEIVELT IPYVKGSRARAL KAG
Sbjct: 1204 GVRAEIVELTTIPYVKGSRARALYKAG 1230


>ref|XP_003545584.1| PREDICTED: DNA polymerase theta-like [Glycine max]
          Length = 2147

 Score =  223 bits (568), Expect = 1e-56
 Identities = 117/148 (79%), Positives = 127/148 (85%), Gaps = 1/148 (0%)
 Frame = -2

Query: 443  FLMRMAHGAPLRMSIKSRENKKGLHSRLSNQNFAIGSCTLS-DDSTLRVCKRFYVALILS 267
            FLM MAHGAPLR S KSR+N + LH++  NQ   I S T + DD TLRVC+RFYVALILS
Sbjct: 1067 FLMYMAHGAPLRASNKSRDNTRSLHNQRRNQ-LGISSATANYDDQTLRVCRRFYVALILS 1125

Query: 266  RLVQEAPVTDVCEAFKVARGMVQALQENAGRFASMVSLFCERLGWHDLEGLVGKFQNRVS 87
             LVQE PV +VCEAFKVARGMVQALQENAGRFASMV++FCERLGWHDLEGLV KFQNRVS
Sbjct: 1126 LLVQEIPVGEVCEAFKVARGMVQALQENAGRFASMVAVFCERLGWHDLEGLVAKFQNRVS 1185

Query: 86   FGVRAEIVELTNIPYVKGSRARALCKAG 3
            FGVRAEIVELT IPYVKGSRAR+L KAG
Sbjct: 1186 FGVRAEIVELTTIPYVKGSRARSLYKAG 1213


>ref|XP_002869254.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315090|gb|EFH45513.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2147

 Score =  216 bits (549), Expect = 2e-54
 Identities = 110/147 (74%), Positives = 124/147 (84%)
 Frame = -2

Query: 443  FLMRMAHGAPLRMSIKSRENKKGLHSRLSNQNFAIGSCTLSDDSTLRVCKRFYVALILSR 264
            FLMRMAHGA +R   K ++ KK L     N++ +     LSD+  LRVCKRF+VALILS+
Sbjct: 1094 FLMRMAHGATVRTINKPQDVKKNLRGEYDNRHGSTSMKMLSDEQMLRVCKRFFVALILSK 1153

Query: 263  LVQEAPVTDVCEAFKVARGMVQALQENAGRFASMVSLFCERLGWHDLEGLVGKFQNRVSF 84
            LVQEA VT+VCEAFKVARGMVQALQENAGRF+SMVS+FCERLGWHDLEGLV KFQNRVSF
Sbjct: 1154 LVQEASVTEVCEAFKVARGMVQALQENAGRFSSMVSVFCERLGWHDLEGLVAKFQNRVSF 1213

Query: 83   GVRAEIVELTNIPYVKGSRARALCKAG 3
            GVRAEIVELT+IPY+KGSRARAL KAG
Sbjct: 1214 GVRAEIVELTSIPYIKGSRARALYKAG 1240