BLASTX nr result

ID: Coptis24_contig00036880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036880
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532941.1| conserved hypothetical protein [Ricinus comm...   126   2e-27
ref|XP_002274782.1| PREDICTED: uncharacterized protein LOC100251...   122   4e-26
ref|XP_002299072.1| predicted protein [Populus trichocarpa] gi|2...   121   7e-26
ref|XP_002864435.1| hypothetical protein ARALYDRAFT_495698 [Arab...   119   3e-25
ref|NP_200423.2| uncharacterized protein [Arabidopsis thaliana] ...   115   3e-24

>ref|XP_002532941.1| conserved hypothetical protein [Ricinus communis]
           gi|223527292|gb|EEF29445.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 220

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/75 (77%), Positives = 66/75 (88%)
 Frame = -2

Query: 303 ERSDNRSLLRCIQELRMKGASFDLSKEPQNAKRMKSSSVEIKWRPHTWCSHYLVTVFLVC 124
           ER+DNR+L RCIQELRMKG+SFDLSKEPQ  KRMKSSSVEIKW+P TWCS YLVT+ LVC
Sbjct: 145 ERNDNRALTRCIQELRMKGSSFDLSKEPQCGKRMKSSSVEIKWKPITWCSQYLVTICLVC 204

Query: 123 FAGMVVPLCKFILCG 79
           F+G++ P  KFILCG
Sbjct: 205 FSGLLFPASKFILCG 219


>ref|XP_002274782.1| PREDICTED: uncharacterized protein LOC100251512 [Vitis vinifera]
          Length = 221

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/74 (74%), Positives = 64/74 (86%)
 Frame = -2

Query: 303 ERSDNRSLLRCIQELRMKGASFDLSKEPQNAKRMKSSSVEIKWRPHTWCSHYLVTVFLVC 124
           E+SD R++ R IQELRMKGASFDLSKEPQN++RMKSSSVEIKWRP  WCS  L+T+ LVC
Sbjct: 147 EKSDGRAVTRFIQELRMKGASFDLSKEPQNSRRMKSSSVEIKWRPLVWCSQNLITICLVC 206

Query: 123 FAGMVVPLCKFILC 82
           F G+V+P CKFILC
Sbjct: 207 FTGLVIPACKFILC 220


>ref|XP_002299072.1| predicted protein [Populus trichocarpa] gi|222846330|gb|EEE83877.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/74 (72%), Positives = 64/74 (86%)
 Frame = -2

Query: 303 ERSDNRSLLRCIQELRMKGASFDLSKEPQNAKRMKSSSVEIKWRPHTWCSHYLVTVFLVC 124
           E++DNR+L RCIQELRMKGASFDLSKEP + K+MKSSSVEIKW+P TWCS YL+T+ LVC
Sbjct: 146 EKNDNRALTRCIQELRMKGASFDLSKEPLSGKKMKSSSVEIKWKPLTWCSQYLITICLVC 205

Query: 123 FAGMVVPLCKFILC 82
           F G+V P  KF+LC
Sbjct: 206 FTGLVFPASKFMLC 219


>ref|XP_002864435.1| hypothetical protein ARALYDRAFT_495698 [Arabidopsis lyrata subsp.
           lyrata] gi|297310270|gb|EFH40694.1| hypothetical protein
           ARALYDRAFT_495698 [Arabidopsis lyrata subsp. lyrata]
          Length = 235

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/75 (70%), Positives = 64/75 (85%)
 Frame = -2

Query: 303 ERSDNRSLLRCIQELRMKGASFDLSKEPQNAKRMKSSSVEIKWRPHTWCSHYLVTVFLVC 124
           ER+DNR+L RC+ ELRMKG+SFDLSKEP + KRMKSSSVEIKW+P TW S YL+T+ L+C
Sbjct: 160 ERNDNRTLTRCVLELRMKGSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFSQYLITIVLLC 219

Query: 123 FAGMVVPLCKFILCG 79
           FAG+  P+ KFILCG
Sbjct: 220 FAGLFFPISKFILCG 234


>ref|NP_200423.2| uncharacterized protein [Arabidopsis thaliana]
           gi|38603818|gb|AAR24654.1| At5g56120 [Arabidopsis
           thaliana] gi|51971979|dbj|BAD44654.1| putative protein
           [Arabidopsis thaliana] gi|332009340|gb|AED96723.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 236

 Score =  115 bits (289), Expect = 3e-24
 Identities = 52/75 (69%), Positives = 63/75 (84%)
 Frame = -2

Query: 303 ERSDNRSLLRCIQELRMKGASFDLSKEPQNAKRMKSSSVEIKWRPHTWCSHYLVTVFLVC 124
           ER+DNR+L RC+ ELRMKG+SFDLSKEP + KRMKSSSVEIKW+P TW S YL+T+ L+C
Sbjct: 161 ERNDNRTLTRCVLELRMKGSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFSQYLITIVLLC 220

Query: 123 FAGMVVPLCKFILCG 79
            AG+  P+ KFILCG
Sbjct: 221 SAGLFFPVSKFILCG 235


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