BLASTX nr result

ID: Coptis24_contig00036871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036871
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36230.3| unnamed protein product [Vitis vinifera]               80   4e-16
ref|XP_002280900.1| PREDICTED: uncharacterized protein LOC100248...    80   4e-16
ref|XP_002280964.1| PREDICTED: uncharacterized protein LOC100244...    79   4e-16
emb|CAN64395.1| hypothetical protein VITISV_036654 [Vitis vinifera]    79   5e-16
ref|XP_002280970.1| PREDICTED: uncharacterized protein LOC100266...    76   1e-15

>emb|CBI36230.3| unnamed protein product [Vitis vinifera]
          Length = 1790

 Score = 79.7 bits (195), Expect(2) = 4e-16
 Identities = 41/96 (42%), Positives = 56/96 (58%)
 Frame = -1

Query: 359  EVFNIVSHPECNGAAENCNMFVPFMIGSDTNASATRFQNFKLTMQNIQCEPGSYHGMDST 180
            E F IV +  CNG  E C+   PF+   +  A+   FQ  KL MQN+ CE  +     ++
Sbjct: 1250 EAFTIVPNWRCNGTDEYCSKLGPFVTDKEIKATDGGFQEVKLFMQNVHCEEKTARDNTNS 1309

Query: 179  ARVAATF*AISLIENQYTSVQRTGLSGMTLFSEGLW 72
            ARV+A F A+   E  YT+ QR+GLS MTL +EG+W
Sbjct: 1310 ARVSAVFRAVPPSEYPYTAAQRSGLSNMTLPAEGIW 1345



 Score = 78.6 bits (192), Expect(2) = 4e-16
 Identities = 41/97 (42%), Positives = 56/97 (57%)
 Frame = -1

Query: 359 EVFNIVSHPECNGAAENCNMFVPFMIGSDTNASATRFQNFKLTMQNIQCEPGSYHGMDST 180
           E F+IV +  C+G  ENCN   PF++ S+  A       F+L M N+ C  G       T
Sbjct: 318 ETFDIVENSRCDGKGENCNNLDPFVLESEVKAINGIPPKFRLMMNNLHCVSGDNFNEPKT 377

Query: 179 ARVAATF*AISLIENQYTSVQRTGLSGMTLFSEGLWN 69
           A+ +A F A S  EN++T+  RTGLSGMT+ +EG WN
Sbjct: 378 AKASAVFRAFS-SENRFTAGGRTGLSGMTISAEGTWN 413



 Score = 30.8 bits (68), Expect(2) = 4e-16
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 60  GQLCMVGCAGKIEPGSNRCS 1
           GQ CM+GC G  E GS+ C+
Sbjct: 417 GQFCMIGCVGFTETGSHGCN 436



 Score = 29.6 bits (65), Expect(2) = 4e-16
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 81   GIMEPFCGQLCMVGCAGKIEPGSNRCS 1
            GI     GQLCMVGC G  +   + C+
Sbjct: 1343 GIWRSSSGQLCMVGCIGSTDAEGSGCN 1369


>ref|XP_002280900.1| PREDICTED: uncharacterized protein LOC100248030 [Vitis vinifera]
          Length = 1059

 Score = 79.7 bits (195), Expect(2) = 4e-16
 Identities = 41/96 (42%), Positives = 56/96 (58%)
 Frame = -1

Query: 359 EVFNIVSHPECNGAAENCNMFVPFMIGSDTNASATRFQNFKLTMQNIQCEPGSYHGMDST 180
           E F IV +  CNG  E C+   PF+   +  A+   FQ  KL MQN+ CE  +     ++
Sbjct: 320 EAFTIVPNWRCNGTDEYCSKLGPFVTDKEIKATDGGFQEVKLFMQNVHCEEKTARDNTNS 379

Query: 179 ARVAATF*AISLIENQYTSVQRTGLSGMTLFSEGLW 72
           ARV+A F A+   E  YT+ QR+GLS MTL +EG+W
Sbjct: 380 ARVSAVFRAVPPSEYPYTAAQRSGLSNMTLPAEGIW 415



 Score = 29.6 bits (65), Expect(2) = 4e-16
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 81  GIMEPFCGQLCMVGCAGKIEPGSNRCS 1
           GI     GQLCMVGC G  +   + C+
Sbjct: 413 GIWRSSSGQLCMVGCIGSTDAEGSGCN 439


>ref|XP_002280964.1| PREDICTED: uncharacterized protein LOC100244611 [Vitis vinifera]
          Length = 1016

 Score = 78.6 bits (192), Expect(2) = 4e-16
 Identities = 41/97 (42%), Positives = 56/97 (57%)
 Frame = -1

Query: 359 EVFNIVSHPECNGAAENCNMFVPFMIGSDTNASATRFQNFKLTMQNIQCEPGSYHGMDST 180
           E F+IV +  C+G  ENCN   PF++ S+  A       F+L M N+ C  G       T
Sbjct: 318 ETFDIVENSRCDGKGENCNNLDPFVLESEVKAINGIPPKFRLMMNNLHCVSGDNFNEPKT 377

Query: 179 ARVAATF*AISLIENQYTSVQRTGLSGMTLFSEGLWN 69
           A+ +A F A S  EN++T+  RTGLSGMT+ +EG WN
Sbjct: 378 AKASAVFRAFS-SENRFTAGGRTGLSGMTISAEGTWN 413



 Score = 30.8 bits (68), Expect(2) = 4e-16
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 60  GQLCMVGCAGKIEPGSNRCS 1
           GQ CM+GC G  E GS+ C+
Sbjct: 417 GQFCMIGCVGFTETGSHGCN 436


>emb|CAN64395.1| hypothetical protein VITISV_036654 [Vitis vinifera]
          Length = 1037

 Score = 79.3 bits (194), Expect(2) = 5e-16
 Identities = 41/96 (42%), Positives = 56/96 (58%)
 Frame = -1

Query: 359 EVFNIVSHPECNGAAENCNMFVPFMIGSDTNASATRFQNFKLTMQNIQCEPGSYHGMDST 180
           E F IV +  CNG  E C+   PF+   +  A+   FQ  KL MQN+ CE  +     ++
Sbjct: 298 EAFTIVPNWRCNGTDEYCSKLGPFVTDKEIKATDGGFQEVKLFMQNVHCEEKTAXDNTNS 357

Query: 179 ARVAATF*AISLIENQYTSVQRTGLSGMTLFSEGLW 72
           ARV+A F A+   E  YT+ QR+GLS MTL +EG+W
Sbjct: 358 ARVSAVFRAVPPSEYPYTAAQRSGLSNMTLPAEGIW 393



 Score = 29.6 bits (65), Expect(2) = 5e-16
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 81  GIMEPFCGQLCMVGCAGKIEPGSNRCS 1
           GI     GQLCMVGC G  +   + C+
Sbjct: 391 GIWRSSSGQLCMVGCIGSTDAEGSGCN 417


>ref|XP_002280970.1| PREDICTED: uncharacterized protein LOC100266929 [Vitis vinifera]
          Length = 1009

 Score = 76.3 bits (186), Expect(2) = 1e-15
 Identities = 39/98 (39%), Positives = 59/98 (60%)
 Frame = -1

Query: 362 AEVFNIVSHPECNGAAENCNMFVPFMIGSDTNASATRFQNFKLTMQNIQCEPGSYHGMDS 183
           AE F+IV++  C+G  E+C+   PF++GS+   +      F++ M ++ C PG      S
Sbjct: 313 AEKFDIVANSGCDGTEEHCHNLGPFVLGSEVKTTNGIQDKFRIMMNDLHCIPGDKL---S 369

Query: 182 TARVAATF*AISLIENQYTSVQRTGLSGMTLFSEGLWN 69
           TA+ +A F  +S  EN Y +  RTGLSGMT+ +EG WN
Sbjct: 370 TAKASAVFRVVSSGENLYIAEGRTGLSGMTITAEGTWN 407



 Score = 31.6 bits (70), Expect(2) = 1e-15
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 60  GQLCMVGCAGKIEPGSNRCS 1
           G+LCMVGC G  E GS+ C+
Sbjct: 411 GRLCMVGCVGLAETGSHGCN 430


Top