BLASTX nr result

ID: Coptis24_contig00036814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036814
         (245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera]           99   3e-19
dbj|BAD29959.1| cysteine protease [Daucus carota]                      99   4e-19
ref|XP_002316833.1| predicted protein [Populus trichocarpa] gi|2...    98   7e-19
dbj|BAF46311.1| cysteine proteinase precursor [Ipomoea nil]            98   8e-19
ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidas...    95   3e-18

>ref|XP_002274223.1| PREDICTED: vignain-like [Vitis vinifera]
          Length = 340

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/63 (77%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
 Frame = +3

Query: 3   NEEFIASRIGYKNSPERKSG--TAFRYENVTAVPSSMDWRKKGAVTPIKDQGQCGSCWAF 176
           NEEF ASR GY  S   +S   T+FRYENV AVPSSMDWRKKGAVTPIKDQGQCG CWAF
Sbjct: 90  NEEFKASRNGYNMSSRPRSSEITSFRYENVAAVPSSMDWRKKGAVTPIKDQGQCGCCWAF 149

Query: 177 SAV 185
           SAV
Sbjct: 150 SAV 152


>dbj|BAD29959.1| cysteine protease [Daucus carota]
          Length = 361

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/63 (74%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
 Frame = +3

Query: 3   NEEFIASRIGYKNSPERKSG--TAFRYENVTAVPSSMDWRKKGAVTPIKDQGQCGSCWAF 176
           NEEF ASR GYK +   +    T FRYENVTAVPSSMDWRKKGAVTP+KDQGQCGSCWAF
Sbjct: 111 NEEFQASRNGYKMAVSSRPSQTTLFRYENVTAVPSSMDWRKKGAVTPVKDQGQCGSCWAF 170

Query: 177 SAV 185
           S +
Sbjct: 171 STI 173


>ref|XP_002316833.1| predicted protein [Populus trichocarpa] gi|222859898|gb|EEE97445.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 97.8 bits (242), Expect(2) = 7e-19
 Identities = 48/63 (76%), Positives = 51/63 (80%), Gaps = 2/63 (3%)
 Frame = +3

Query: 3   NEEFIASRIGYKNSPERKSGTA--FRYENVTAVPSSMDWRKKGAVTPIKDQGQCGSCWAF 176
           NEEF ASR GYK S    S +   FRYENV+AVPS+MDWRKKGAVTPIKDQGQCG CWAF
Sbjct: 58  NEEFQASRNGYKMSAHLSSSSTKPFRYENVSAVPSTMDWRKKGAVTPIKDQGQCGCCWAF 117

Query: 177 SAV 185
           SAV
Sbjct: 118 SAV 120



 Score = 20.8 bits (42), Expect(2) = 7e-19
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +2

Query: 185 AVATIEGLTQMTT 223
           AVA  EG+TQ++T
Sbjct: 119 AVAATEGITQLST 131


>dbj|BAF46311.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 339

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/61 (73%), Positives = 51/61 (83%)
 Frame = +3

Query: 3   NEEFIASRIGYKNSPERKSGTAFRYENVTAVPSSMDWRKKGAVTPIKDQGQCGSCWAFSA 182
           N+EFIASR GY    E  S T FRYENV+AVP+++DWRKKGAVTP+KDQGQCG CWAFSA
Sbjct: 91  NKEFIASRNGYILPHECSSNTPFRYENVSAVPTTVDWRKKGAVTPVKDQGQCGCCWAFSA 150

Query: 183 V 185
           V
Sbjct: 151 V 151


>ref|XP_002280204.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1 [Vitis vinifera]
          Length = 341

 Score = 95.1 bits (235), Expect(2) = 3e-18
 Identities = 45/61 (73%), Positives = 50/61 (81%)
 Frame = +3

Query: 3   NEEFIASRIGYKNSPERKSGTAFRYENVTAVPSSMDWRKKGAVTPIKDQGQCGSCWAFSA 182
           NEEF ASR  +K        T+F+YENVTAVPS++DWRKKGAVTPIKDQGQCGSCWAFSA
Sbjct: 93  NEEFRASRNRFKAHICSTEATSFKYENVTAVPSTVDWRKKGAVTPIKDQGQCGSCWAFSA 152

Query: 183 V 185
           V
Sbjct: 153 V 153



 Score = 21.6 bits (44), Expect(2) = 3e-18
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +2

Query: 185 AVATIEGLTQMTT 223
           AVA +EG+TQ++T
Sbjct: 152 AVAAMEGITQLST 164


Top