BLASTX nr result

ID: Coptis24_contig00036813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036813
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   131   5e-29
emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]   131   5e-29
ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_003545953.1| PREDICTED: uncharacterized protein LOC100820...   124   1e-26
ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   124   1e-26

>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/89 (66%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = -3

Query: 269 MLGCYTQPNNRPLFGWVLSAKDDGKS-FPSTLEVPVDYTLVWTSEGTNIKQDGNGYIWLP 93
           MLGCY+QPN +PLFGWVL+ KD+  +     L+ P+DYTLVW+SE   IKQDGNGY+WLP
Sbjct: 90  MLGCYSQPNKKPLFGWVLAGKDNTNNPLGGALKKPIDYTLVWSSESLKIKQDGNGYVWLP 149

Query: 92  IPPNGYKAVGLVVTNSSVKPPLDKIRCVR 6
            PP+GYKAVG V+TN   KP LDKIRCVR
Sbjct: 150 TPPDGYKAVGHVITNLPEKPSLDKIRCVR 178


>emb|CAN82512.1| hypothetical protein VITISV_002153 [Vitis vinifera]
          Length = 913

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/89 (66%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = -3

Query: 269 MLGCYTQPNNRPLFGWVLSAKDDGKS-FPSTLEVPVDYTLVWTSEGTNIKQDGNGYIWLP 93
           MLGCY+QPN +PLFGWVL+ KD+  +     L+ P+DYTLVW+SE   IKQDGNGY+WLP
Sbjct: 59  MLGCYSQPNKKPLFGWVLAGKDNTNNPLGGALKKPIDYTLVWSSESLKIKQDGNGYVWLP 118

Query: 92  IPPNGYKAVGLVVTNSSVKPPLDKIRCVR 6
            PP+GYKAVG V+TN   KP LDKIRCVR
Sbjct: 119 TPPDGYKAVGHVITNLPEKPSLDKIRCVR 147


>ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/88 (67%), Positives = 69/88 (78%)
 Frame = -3

Query: 269 MLGCYTQPNNRPLFGWVLSAKDDGKSFPSTLEVPVDYTLVWTSEGTNIKQDGNGYIWLPI 90
           MLGCY+QPNNR L+GWVL+ +D+  S    L+ P+DYTLVW+SE   IKQDG GYIWLP 
Sbjct: 123 MLGCYSQPNNRSLYGWVLAGRDETGS---ALKQPIDYTLVWSSESLQIKQDGVGYIWLPT 179

Query: 89  PPNGYKAVGLVVTNSSVKPPLDKIRCVR 6
           PP+GYKA+G VVT S  KPPL KIRCVR
Sbjct: 180 PPDGYKALGHVVTKSPQKPPLGKIRCVR 207


>ref|XP_003545953.1| PREDICTED: uncharacterized protein LOC100820603 [Glycine max]
          Length = 874

 Score =  124 bits (310), Expect = 1e-26
 Identities = 57/88 (64%), Positives = 62/88 (70%)
 Frame = -3

Query: 269 MLGCYTQPNNRPLFGWVLSAKDDGKSFPSTLEVPVDYTLVWTSEGTNIKQDGNGYIWLPI 90
           MLGCY QPNN+PL GWVL  KD+  +    L  PVDY LVW ++   IKQDG GYIWLPI
Sbjct: 84  MLGCYCQPNNKPLHGWVLVGKDNSSTLNGALAKPVDYKLVWNTKSLKIKQDGQGYIWLPI 143

Query: 89  PPNGYKAVGLVVTNSSVKPPLDKIRCVR 6
            P GYK VG VVT S  KP LDKIRCVR
Sbjct: 144 APEGYKPVGHVVTTSPEKPSLDKIRCVR 171


>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
           gi|223537142|gb|EEF38775.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 551

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/88 (65%), Positives = 67/88 (76%)
 Frame = -3

Query: 269 MLGCYTQPNNRPLFGWVLSAKDDGKSFPSTLEVPVDYTLVWTSEGTNIKQDGNGYIWLPI 90
           MLGCY Q N+RPL+GWVL+ KDD       LE P+DYTLVW+SE   IKQD  GYIWLP 
Sbjct: 86  MLGCYCQSNSRPLYGWVLAGKDDAGG---ALEKPIDYTLVWSSESLKIKQDSIGYIWLPT 142

Query: 89  PPNGYKAVGLVVTNSSVKPPLDKIRCVR 6
            P+GY+AVGLVVT+S  KP LDK+RCVR
Sbjct: 143 APDGYRAVGLVVTSSPEKPSLDKMRCVR 170


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