BLASTX nr result

ID: Coptis24_contig00036798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036798
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34572.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002280885.1| PREDICTED: early nodulin-like protein 1 [Vit...    84   1e-14
ref|XP_002297953.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002518894.1| Stellacyanin, putative [Ricinus communis] gi...    68   9e-10
ref|XP_004146129.1| PREDICTED: early nodulin-like protein 1-like...    66   3e-09

>emb|CBI34572.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = -2

Query: 425 GKYFFSSGEPGHCEKSQKLAISVLTGDG-SAFSPSYGPSILPDTAPSYQNAFGSIPSTSS 249
           G+++F+S  PGHCEK QKL ISVL+G+G SAFSPSYGPS LPD+  SY   FGSIP+ +S
Sbjct: 90  GEFYFTSAVPGHCEKKQKLQISVLSGNGSSAFSPSYGPSALPDS--SYPTVFGSIPAANS 147

Query: 248 SMPLQ 234
           S P Q
Sbjct: 148 SSPSQ 152


>ref|XP_002280885.1| PREDICTED: early nodulin-like protein 1 [Vitis vinifera]
           gi|147827006|emb|CAN62283.1| hypothetical protein
           VITISV_034699 [Vitis vinifera]
          Length = 192

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = -2

Query: 425 GKYFFSSGEPGHCEKSQKLAISVLTGDG-SAFSPSYGPSILPDTAPSYQNAFGSIPSTSS 249
           G+++F+S  PGHCEK QKL ISVL+G+G SAFSPSYGPS LPD+  SY   FGSIP+ +S
Sbjct: 108 GEFYFTSAVPGHCEKKQKLQISVLSGNGSSAFSPSYGPSALPDS--SYPTVFGSIPAANS 165

Query: 248 SMPLQ 234
           S P Q
Sbjct: 166 SSPSQ 170


>ref|XP_002297953.1| predicted protein [Populus trichocarpa] gi|222845211|gb|EEE82758.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/61 (62%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = -2

Query: 425 GKYFFSSGEPGHCEKSQKLAISVL-TGDGSAFSPSYGPSILPDTAPSYQNAFGSIPSTSS 249
           G ++F+SG  GHC+K QKL ISV   G  SA+SPSYGPS LPD+APSY   FGSIP   S
Sbjct: 108 GDFYFTSGVQGHCQKKQKLHISVPGNGSASAYSPSYGPSALPDSAPSYPTVFGSIPLPPS 167

Query: 248 S 246
           S
Sbjct: 168 S 168


>ref|XP_002518894.1| Stellacyanin, putative [Ricinus communis]
           gi|223541881|gb|EEF43427.1| Stellacyanin, putative
           [Ricinus communis]
          Length = 194

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/70 (57%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
 Frame = -2

Query: 425 GKYFFSSGEPGHCEKSQKLAISVLTGDGSAFSPSYGPSILPDT--APSYQNAFGSIP-ST 255
           G ++F+SG PGHCEK QKL ISV  G+ S  SPS G S LPDT  APSY   FG+IP   
Sbjct: 108 GHFYFTSGVPGHCEKKQKLHISV--GNDSDISPSNGSSALPDTAAAPSYPTNFGTIPLPP 165

Query: 254 SSSMPLQVFS 225
           S+S P   FS
Sbjct: 166 SASSPTYRFS 175


>ref|XP_004146129.1| PREDICTED: early nodulin-like protein 1-like [Cucumis sativus]
           gi|449495019|ref|XP_004159711.1| PREDICTED: early
           nodulin-like protein 1-like [Cucumis sativus]
          Length = 199

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/60 (51%), Positives = 40/60 (66%)
 Frame = -2

Query: 425 GKYFFSSGEPGHCEKSQKLAISVLTGDGSAFSPSYGPSILPDTAPSYQNAFGSIPSTSSS 246
           G  FF SG+ GHCEK+QKL ISVL+G+GS+ S       LP+ +PSY   FG IP+  S+
Sbjct: 107 GDLFFISGDAGHCEKNQKLHISVLSGNGSSASAPSSDGSLPEISPSYPTVFGGIPAAPSA 166


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