BLASTX nr result

ID: Coptis24_contig00036790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036790
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001019178.1| ribosomal protein L22 [Ranunculus macranthus...   243   2e-62
dbj|BAG06440.1| ribosomal protein L22 [Elaeagnus formosana]           242   2e-62
ref|YP_002836130.1| ribosomal protein L22 [Megaleranthis sanicul...   236   1e-60
dbj|BAG06507.1| ribosomal protein L22 [Stauntonia hexaphylla]         190   1e-46
ref|YP_740690.1| ribosomal protein L22 [Nandina domestica] gi|12...   180   1e-43

>ref|YP_001019178.1| ribosomal protein L22 [Ranunculus macranthus]
           gi|215274766|sp|A2CHX2.1|RK22_RANMC RecName: Full=50S
           ribosomal protein L22, chloroplastic
           gi|124074980|gb|ABM90427.1| ribosomal protein L22
           [Ranunculus macranthus]
          Length = 179

 Score =  243 bits (619), Expect = 2e-62
 Identities = 115/126 (91%), Positives = 119/126 (94%)
 Frame = +2

Query: 5   KLIYSAAANASHNMGFNETALIISQAEVNEGTIMKKIKPRARGRSYPIKRPTCHITIVLQ 184
           KL+YSAAANASHNMGFNETALIISQAEVNEGTI KK+KPRARGRS+ IKRPTCHITIVLQ
Sbjct: 56  KLVYSAAANASHNMGFNETALIISQAEVNEGTITKKLKPRARGRSFAIKRPTCHITIVLQ 115

Query: 185 DISKDKNYFIWLRKYGWIYKDKYTDVRERYLYMNMMDHMLYRNRMTWANRKTIWPYRDSE 364
           DISKDK YFIWLRKYGWIYKDKYTDVRERYLY  MMDHMLYRNRMTW NR+ IWPYRDSE
Sbjct: 116 DISKDKKYFIWLRKYGWIYKDKYTDVRERYLY--MMDHMLYRNRMTWINREMIWPYRDSE 173

Query: 365 VLWDKK 382
           VLWDKK
Sbjct: 174 VLWDKK 179


>dbj|BAG06440.1| ribosomal protein L22 [Elaeagnus formosana]
          Length = 179

 Score =  242 bits (618), Expect = 2e-62
 Identities = 114/126 (90%), Positives = 119/126 (94%)
 Frame = +2

Query: 5   KLIYSAAANASHNMGFNETALIISQAEVNEGTIMKKIKPRARGRSYPIKRPTCHITIVLQ 184
           KL+YSAAANASHNMGFNETALIISQAEVNEGTI KK+KPRARGRS+ IKRPTCHITIVLQ
Sbjct: 56  KLVYSAAANASHNMGFNETALIISQAEVNEGTITKKLKPRARGRSFAIKRPTCHITIVLQ 115

Query: 185 DISKDKNYFIWLRKYGWIYKDKYTDVRERYLYMNMMDHMLYRNRMTWANRKTIWPYRDSE 364
           DISKDK YFIWLRKYGW+YKDKYTDVRERYLY  MMDHMLYRNRMTW NR+ IWPYRDSE
Sbjct: 116 DISKDKKYFIWLRKYGWVYKDKYTDVRERYLY--MMDHMLYRNRMTWINREMIWPYRDSE 173

Query: 365 VLWDKK 382
           VLWDKK
Sbjct: 174 VLWDKK 179


>ref|YP_002836130.1| ribosomal protein L22 [Megaleranthis saniculifolia]
           gi|226933922|gb|ACO92055.1| ribosomal protein L22
           [Megaleranthis saniculifolia]
          Length = 177

 Score =  236 bits (603), Expect = 1e-60
 Identities = 113/127 (88%), Positives = 120/127 (94%)
 Frame = +2

Query: 2   FKLIYSAAANASHNMGFNETALIISQAEVNEGTIMKKIKPRARGRSYPIKRPTCHITIVL 181
           FKL+YSAAANA HNMGFNETALIISQAEVNEGTIMKK+KPRARGRSY IK+PTCHITIVL
Sbjct: 55  FKLVYSAAANARHNMGFNETALIISQAEVNEGTIMKKLKPRARGRSYAIKKPTCHITIVL 114

Query: 182 QDISKDKNYFIWLRKYGWIYKDKYTDVRERYLYMNMMDHMLYRNRMTWANRKTIWPYRDS 361
           +DISK+KNYFIWLRKYGW+YKDKYTDVRERYLY  MMD  LYRNRMTWANR+ IWPYRDS
Sbjct: 115 KDISKEKNYFIWLRKYGWVYKDKYTDVRERYLY--MMD--LYRNRMTWANREMIWPYRDS 170

Query: 362 EVLWDKK 382
           EVLWDKK
Sbjct: 171 EVLWDKK 177


>dbj|BAG06507.1| ribosomal protein L22 [Stauntonia hexaphylla]
          Length = 168

 Score =  190 bits (482), Expect = 1e-46
 Identities = 92/127 (72%), Positives = 104/127 (81%)
 Frame = +2

Query: 2   FKLIYSAAANASHNMGFNETALIISQAEVNEGTIMKKIKPRARGRSYPIKRPTCHITIVL 181
           FKL+YSAAANASHNMGFNE  LIIS+AEVN GTI+K++KPRARGRSYPIK+PTCHITIVL
Sbjct: 55  FKLVYSAAANASHNMGFNEADLIISKAEVNRGTIVKRLKPRARGRSYPIKKPTCHITIVL 114

Query: 182 QDISKDKNYFIWLRKYGWIYKDKYTDVRERYLYMNMMDHMLYRNRMTWANRKTIWPYRDS 361
           QDISKD  YFIWLRKYGWIYKDKYTD+RERYLY      M+ R+R+ WA         +S
Sbjct: 115 QDISKDPKYFIWLRKYGWIYKDKYTDIRERYLY------MIDRDRLKWAT-------SES 161

Query: 362 EVLWDKK 382
           E +WDKK
Sbjct: 162 EAVWDKK 168


>ref|YP_740690.1| ribosomal protein L22 [Nandina domestica]
           gi|122165922|sp|Q09FS1.1|RK22_NANDO RecName: Full=50S
           ribosomal protein L22, chloroplastic
           gi|114054511|gb|ABI49904.1| ribosomal protein L22
           [Nandina domestica]
          Length = 170

 Score =  180 bits (456), Expect = 1e-43
 Identities = 90/128 (70%), Positives = 104/128 (81%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   FKLIYSAAANASHNMGFNETALIISQAEVNEGTIMKKIKPRARGRSYPIKRPTCHITIVL 181
           FKL+YSAAANA++N GFN+TALIISQAEVNEGT++KK+KPRARGRSYPIKRPTCHITIVL
Sbjct: 52  FKLVYSAAANATNNKGFNKTALIISQAEVNEGTVVKKLKPRARGRSYPIKRPTCHITIVL 111

Query: 182 QDISKDKNYFIWLRKY-GWIYKDKYTDVRERYLYMNMMDHMLYRNRMTWANRKTIWPYRD 358
           QDISKDKN++IWLRK  GWIYK+KY D+RE+Y Y   +   L R RM WAN         
Sbjct: 112 QDISKDKNFYIWLRKKGGWIYKEKYIDIREKYEY--FLHEALNRGRMEWAN-------SG 162

Query: 359 SEVLWDKK 382
            EV+WDKK
Sbjct: 163 YEVVWDKK 170


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