BLASTX nr result

ID: Coptis24_contig00036788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036788
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532792.1| conserved hypothetical protein [Ricinus comm...   255   3e-66
emb|CBI22085.3| unnamed protein product [Vitis vinifera]              248   4e-64
emb|CBI33832.3| unnamed protein product [Vitis vinifera]              244   4e-63
ref|XP_003545150.1| PREDICTED: LOW QUALITY PROTEIN: anaphase-pro...   243   1e-62
ref|XP_004137248.1| PREDICTED: anaphase-promoting complex subuni...   239   2e-61

>ref|XP_002532792.1| conserved hypothetical protein [Ricinus communis]
            gi|223527462|gb|EEF29594.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 917

 Score =  255 bits (651), Expect = 3e-66
 Identities = 129/167 (77%), Positives = 146/167 (87%)
 Frame = +3

Query: 3    DEFGVLASSVSGVDMGVKTEACLRHSRTLLAANQFSQAESVAHSLFCMCYKFNLQVEHAI 182
            +E GVLASSV+GVDM +K E  LRH+RTLLAA QFS+A +VAHSLFCMCYKFN+QV++A 
Sbjct: 683  NELGVLASSVNGVDMELKRETSLRHARTLLAAKQFSEAAAVAHSLFCMCYKFNMQVQNAT 742

Query: 183  SLLLLAEIHKKAGNAVLGISYALASLSFCQSLNLDLLEASTTLMLGELWLSLGSNHAKRA 362
             LLLLAEIHKK+GNAVLG+ YALASLSFCQS NLDLL+AS TL L ELWLSLGSNHAKRA
Sbjct: 743  VLLLLAEIHKKSGNAVLGLPYALASLSFCQSFNLDLLKASATLTLAELWLSLGSNHAKRA 802

Query: 363  LNLVHKSLPMIFGHGGLELRARANVAVAKCHLSDSSYSVSEDFEAVL 503
            L+LVH +LPM+ GHGGLELRARA +A AKC+LSDSSYSV ED E VL
Sbjct: 803  LSLVHGALPMVLGHGGLELRARARIAEAKCYLSDSSYSVFEDPEVVL 849


>emb|CBI22085.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  248 bits (633), Expect = 4e-64
 Identities = 128/167 (76%), Positives = 144/167 (86%)
 Frame = +3

Query: 3    DEFGVLASSVSGVDMGVKTEACLRHSRTLLAANQFSQAESVAHSLFCMCYKFNLQVEHAI 182
            DE GVLASSV+GVDM +KTEA LRH+RTLLAANQF QA +VAHSLFCMCYKFNLQVE+A 
Sbjct: 688  DELGVLASSVTGVDMELKTEASLRHARTLLAANQFGQAAAVAHSLFCMCYKFNLQVENAT 747

Query: 183  SLLLLAEIHKKAGNAVLGISYALASLSFCQSLNLDLLEASTTLMLGELWLSLGSNHAKRA 362
             LLLLAEIHKK+GNAVLG+ YALASLSFCQS NLDLL+AS TL L ELWLSLGSNHA+RA
Sbjct: 748  VLLLLAEIHKKSGNAVLGLPYALASLSFCQSFNLDLLKASATLTLAELWLSLGSNHAERA 807

Query: 363  LNLVHKSLPMIFGHGGLELRARANVAVAKCHLSDSSYSVSEDFEAVL 503
              LV  +LPMI GHGGLELR+RA +A AKC+LS+ S+SV E+ E VL
Sbjct: 808  SILVQGALPMILGHGGLELRSRAYIAEAKCYLSNPSFSVFENSEVVL 854


>emb|CBI33832.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  244 bits (624), Expect = 4e-63
 Identities = 127/167 (76%), Positives = 141/167 (84%)
 Frame = +3

Query: 3   DEFGVLASSVSGVDMGVKTEACLRHSRTLLAANQFSQAESVAHSLFCMCYKFNLQVEHAI 182
           DE GVLASSV GVDM +KTEA LRH+RTLLAANQF QA +VAHSLFCMCYKFNLQVE+A 
Sbjct: 19  DELGVLASSVIGVDMELKTEASLRHARTLLAANQFGQAAAVAHSLFCMCYKFNLQVENAT 78

Query: 183 SLLLLAEIHKKAGNAVLGISYALASLSFCQSLNLDLLEASTTLMLGELWLSLGSNHAKRA 362
            LLLLAEIHKK+GNAVLG+ YALASLSFCQS NLDLL+AS TL L ELWLSLGSNH +RA
Sbjct: 79  VLLLLAEIHKKSGNAVLGLPYALASLSFCQSFNLDLLKASATLTLAELWLSLGSNHVERA 138

Query: 363 LNLVHKSLPMIFGHGGLELRARANVAVAKCHLSDSSYSVSEDFEAVL 503
             LV  +LPMI GHGGLEL ARA +A AKC+LS+ S+SV E+ E VL
Sbjct: 139 SILVQGALPMILGHGGLELHARAYIAEAKCYLSNPSFSVFENSEVVL 185


>ref|XP_003545150.1| PREDICTED: LOW QUALITY PROTEIN: anaphase-promoting complex subunit
            5-like [Glycine max]
          Length = 922

 Score =  243 bits (620), Expect = 1e-62
 Identities = 121/167 (72%), Positives = 143/167 (85%)
 Frame = +3

Query: 3    DEFGVLASSVSGVDMGVKTEACLRHSRTLLAANQFSQAESVAHSLFCMCYKFNLQVEHAI 182
            DE GVLAS V+GVDM +KTEA LRH+RTLLAANQF +A +VAHSLFCMCYK+NLQVE+A 
Sbjct: 689  DELGVLASRVTGVDMELKTEASLRHARTLLAANQFREAAAVAHSLFCMCYKYNLQVENAS 748

Query: 183  SLLLLAEIHKKAGNAVLGISYALASLSFCQSLNLDLLEASTTLMLGELWLSLGSNHAKRA 362
             LLLLAEIHKK+GNAVLG+ YALASLSFC S NLDLL+AS TL L ELWLSLGS+HA RA
Sbjct: 749  VLLLLAEIHKKSGNAVLGLPYALASLSFCLSFNLDLLKASATLTLAELWLSLGSSHATRA 808

Query: 363  LNLVHKSLPMIFGHGGLELRARANVAVAKCHLSDSSYSVSEDFEAVL 503
            LNL+H + PMI GHGGLELR+RA +  AKC+L DS+++V E++E V+
Sbjct: 809  LNLIHGAFPMILGHGGLELRSRAFIVEAKCYLCDSNFNVFENYEIVI 855


>ref|XP_004137248.1| PREDICTED: anaphase-promoting complex subunit 5-like [Cucumis
            sativus] gi|449483128|ref|XP_004156500.1| PREDICTED:
            anaphase-promoting complex subunit 5-like [Cucumis
            sativus]
          Length = 917

 Score =  239 bits (610), Expect = 2e-61
 Identities = 119/167 (71%), Positives = 142/167 (85%)
 Frame = +3

Query: 3    DEFGVLASSVSGVDMGVKTEACLRHSRTLLAANQFSQAESVAHSLFCMCYKFNLQVEHAI 182
            +E GVLASSV+ VD+ +KTEA  RH+RTLLAANQFS+A  VAHSLFC+CYK+NLQV++A 
Sbjct: 684  NELGVLASSVTSVDLDLKTEASFRHARTLLAANQFSEAARVAHSLFCLCYKYNLQVQNAS 743

Query: 183  SLLLLAEIHKKAGNAVLGISYALASLSFCQSLNLDLLEASTTLMLGELWLSLGSNHAKRA 362
             LLLLAEIHKK+GNAV+G+ YALASLSFCQS NLDLL+AS TL + ELWLSLG +H+KRA
Sbjct: 744  VLLLLAEIHKKSGNAVVGLPYALASLSFCQSFNLDLLKASATLTIAELWLSLGPSHSKRA 803

Query: 363  LNLVHKSLPMIFGHGGLELRARANVAVAKCHLSDSSYSVSEDFEAVL 503
            LNL+H + PMI GHGGLELRARA +  AKC+LS  ++SVSED E VL
Sbjct: 804  LNLLHGAFPMILGHGGLELRARAFIVEAKCYLSSPTFSVSEDPEVVL 850