BLASTX nr result

ID: Coptis24_contig00036772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036772
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_01679079.1| conserved hypothetical protein [Vibrio choler...    74   3e-22
ref|ZP_19725331.1| hypothetical protein A15U_04539, partial [Esc...   101   6e-20
ref|ZP_19613896.1| hypothetical protein WCM_04769, partial [Esch...   101   6e-20
ref|ZP_11545541.1| hypothetical protein HMPREF9439_05376 [Escher...   101   6e-20
ref|ZP_19375438.1| hypothetical protein MO7_05239, partial [Esch...   100   2e-19

>ref|ZP_01679079.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
           gi|121546188|gb|EAX56522.1| conserved hypothetical
           protein [Vibrio cholerae 2740-80]
          Length = 108

 Score = 73.9 bits (180), Expect(2) = 3e-22
 Identities = 38/57 (66%), Positives = 42/57 (73%)
 Frame = +3

Query: 3   LRPARDRRLGKPLPHQLANRTSVRPAARGPKVPRFLP*DVCGISVRFRTLSPTTRQI 173
           LRPARDRRLG+PLPHQLAN T   P A+GPKVP F    +CGIS RF+ LSP  R I
Sbjct: 6   LRPARDRRLGEPLPHQLANPTWAYPVAQGPKVPCFALXRLCGISHRFQWLSPLYRAI 62



 Score = 55.8 bits (133), Expect(2) = 3e-22
 Identities = 30/45 (66%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
 Frame = +2

Query: 155 PHYQADS*ASLTRPPLSREASFS--LPLDLHVLSLPPAFNLSQDQ 283
           P Y+A S A LTRPPL+ + + S  LPLDLHVL LPPAFNLS DQ
Sbjct: 57  PLYRAISQALLTRPPLATQGTSSSVLPLDLHVLGLPPAFNLSHDQ 101


>ref|ZP_19725331.1| hypothetical protein A15U_04539, partial [Escherichia coli KTE210]
           gi|431003121|gb|ELD18608.1| hypothetical protein
           A15U_04539, partial [Escherichia coli KTE210]
          Length = 151

 Score =  101 bits (252), Expect = 6e-20
 Identities = 61/94 (64%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
 Frame = +1

Query: 1   LSDQLEIVALVSLYPTN*LIAHRFVQPREARRYPAFSHRTYAVLASVSERYPPLPGRFLG 180
           LSDQL IVALVS YPTN LI    ++ +EARR P+   R YAVLA+VS  YPP  G F  
Sbjct: 58  LSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRRYAVLATVSSSYPPPSGSFPD 117

Query: 181 ITHPSAA-LKRSKLLS-TARLACVKPAASVQSEP 276
           ITHPSA   +RSKLL  T RLACV+PAASVQSEP
Sbjct: 118 ITHPSATRQQRSKLLPVTVRLACVRPAASVQSEP 151


>ref|ZP_19613896.1| hypothetical protein WCM_04769, partial [Escherichia coli KTE10]
           gi|430883699|gb|ELC06673.1| hypothetical protein
           WCM_04769, partial [Escherichia coli KTE10]
          Length = 151

 Score =  101 bits (252), Expect = 6e-20
 Identities = 61/94 (64%), Positives = 69/94 (73%), Gaps = 2/94 (2%)
 Frame = +1

Query: 1   LSDQLEIVALVSLYPTN*LIAHRFVQPREARRYPAFSHRTYAVLASVSERYPPLPGRFLG 180
           LSDQL IVALVS YPTN LI    ++ +EARR P+   R YAVLA+VS  YPP  G F  
Sbjct: 58  LSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRHYAVLATVSSSYPPPSGSFPD 117

Query: 181 ITHPSAALKR-SKLLS-TARLACVKPAASVQSEP 276
           ITHPSA  ++ SKLLS T RLACV+PAASVQSEP
Sbjct: 118 ITHPSATRQQSSKLLSVTVRLACVRPAASVQSEP 151


>ref|ZP_11545541.1| hypothetical protein HMPREF9439_05376 [Escherichia coli MS 79-10]
           gi|342926033|gb|EGU94755.1| hypothetical protein
           HMPREF9439_05376 [Escherichia coli MS 79-10]
          Length = 99

 Score =  101 bits (252), Expect = 6e-20
 Identities = 61/94 (64%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
 Frame = +1

Query: 1   LSDQLEIVALVSLYPTN*LIAHRFVQPREARRYPAFSHRTYAVLASVSERYPPLPGRFLG 180
           LSDQL IVALVS YPTN LI    ++ +EARR P+   R YAVLA+VS  YPP  G F  
Sbjct: 6   LSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRRYAVLATVSSSYPPPSGSFPD 65

Query: 181 ITHPSAALKR-SKLLS-TARLACVKPAASVQSEP 276
           ITHPSA  +R SKLL  T RLACV+PAASVQSEP
Sbjct: 66  ITHPSATRQRSSKLLPVTVRLACVRPAASVQSEP 99


>ref|ZP_19375438.1| hypothetical protein MO7_05239, partial [Escherichia coli O104:H4
           str. Ec11-9941] gi|429921045|ref|ZP_19386971.1|
           hypothetical protein O7E_02948, partial [Escherichia
           coli O104:H4 str. Ec11-5604]
           gi|429953405|ref|ZP_19419247.1| hypothetical protein
           S7Y_04888, partial [Escherichia coli O104:H4 str.
           Ec12-0465] gi|429439347|gb|EKZ75334.1| hypothetical
           protein O7E_02948, partial [Escherichia coli O104:H4
           str. Ec11-5604] gi|429441943|gb|EKZ77907.1| hypothetical
           protein S7Y_04888, partial [Escherichia coli O104:H4
           str. Ec12-0465] gi|429458824|gb|EKZ94644.1| hypothetical
           protein MO7_05239, partial [Escherichia coli O104:H4
           str. Ec11-9941]
          Length = 151

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/94 (61%), Positives = 66/94 (70%), Gaps = 2/94 (2%)
 Frame = +1

Query: 1   LSDQLEIVALVSLYPTN*LIAHRFVQPREARRYPAFSHRTYAVLASVSERYPPLPGRFLG 180
           LSDQL IVALVS YPTN LI    ++ +EARR P+   R YAVLA+VS  YPP  G F  
Sbjct: 58  LSDQLGIVALVSRYPTNKLIPSGHIRWQEARRSPSLVLRRYAVLATVSSSYPPPSGSFPD 117

Query: 181 ITHPSAALKRSKLL--STARLACVKPAASVQSEP 276
           ITHPSA  +R+  L   T RLACV+PAASVQSEP
Sbjct: 118 ITHPSATRQRNSKLFPVTVRLACVRPAASVQSEP 151


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