BLASTX nr result

ID: Coptis24_contig00036769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036769
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528251.1| copper ion binding protein, putative [Ricinu...    77   1e-12
ref|XP_002316891.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
gb|AAZ85252.1| CT099 [Solanum ochranthum]                              74   9e-12
gb|AAZ85265.1| CT099 [Solanum pimpinellifolium] gi|73808532|gb|A...    73   2e-11
gb|AAZ85253.1| CT099 [Solanum chmielewskii] gi|73808508|gb|AAZ85...    73   2e-11

>ref|XP_002528251.1| copper ion binding protein, putative [Ricinus communis]
           gi|223532337|gb|EEF34136.1| copper ion binding protein,
           putative [Ricinus communis]
          Length = 379

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/109 (38%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
 Frame = -2

Query: 309 NSVLVVDKDHYSACNTTKPIKSLESGLSYYNLDTPGRHYFISGKPGSCQKGQKLALVVLS 130
           +SVLVV KD Y +CNT  PIK+L SG S +  D  G  +FI+G   +CQKGQ+L +VVL+
Sbjct: 69  DSVLVVSKDDYYSCNTKNPIKNLNSGTSVFQFDRSGPFFFITGNEENCQKGQRLIVVVLA 128

Query: 129 VR-------NXXXXXXXXXXXXXXXXXSQVAHTPKAQTPLSTSPVAQTP 4
           +R                            AH+P + +P S SP+A+ P
Sbjct: 129 IRPKPTKESPKSSPAPTVSSPPPAIPPESSAHSPSSPSPKSPSPIAKPP 177


>ref|XP_002316891.1| predicted protein [Populus trichocarpa] gi|222859956|gb|EEE97503.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/102 (38%), Positives = 56/102 (54%)
 Frame = -2

Query: 309 NSVLVVDKDHYSACNTTKPIKSLESGLSYYNLDTPGRHYFISGKPGSCQKGQKLALVVLS 130
           +SVL V KD Y++CNT KP+K+++SG S +  D  G  +FISG   +C+KGQKL + VL+
Sbjct: 68  DSVLRVTKDDYNSCNTKKPLKTMDSGSSVFQFDKSGPFFFISGNEDNCRKGQKLIVAVLA 127

Query: 129 VRNXXXXXXXXXXXXXXXXXSQVAHTPKAQTPLSTSPVAQTP 4
           VR                  S   H P      S++P+A+ P
Sbjct: 128 VRTKQTPTPAYPPATSPKAPSPEGHNPAQAPSRSSAPIAKPP 169


>gb|AAZ85252.1| CT099 [Solanum ochranthum]
          Length = 305

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/107 (39%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
 Frame = -2

Query: 309 NSVLVVDKDHYSACNTTKPIKSLESGLSYYNLDTPGRHYFISGKPGSCQKGQKLALVVLS 130
           +SVL V KD Y  CNT  PIK +E G S + LD  G  YFISG   +C KGQKL +VV+S
Sbjct: 31  DSVLEVSKDDYDKCNTGNPIKKMEDGNSIFTLDRSGPFYFISGNKDNCDKGQKLQIVVIS 90

Query: 129 VRNXXXXXXXXXXXXXXXXXSQVAHTPKAQTPLS----TSPVAQTPK 1
            RN                      +P    P +    +SP A  PK
Sbjct: 91  ARNQGKPPQTPAPGVAPPSNGSTTPSPTGSPPSTPSGGSSPAAAPPK 137


>gb|AAZ85265.1| CT099 [Solanum pimpinellifolium] gi|73808532|gb|AAZ85266.1| CT099
           [Solanum pimpinellifolium] gi|73808536|gb|AAZ85268.1|
           CT099 [Solanum pimpinellifolium]
          Length = 301

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/63 (55%), Positives = 41/63 (65%)
 Frame = -2

Query: 309 NSVLVVDKDHYSACNTTKPIKSLESGLSYYNLDTPGRHYFISGKPGSCQKGQKLALVVLS 130
           +SVL V KD Y  CNT  PIK +E G S + LD  G  YFISG   +C KGQKL +VV+S
Sbjct: 31  DSVLEVSKDDYDKCNTGNPIKKMEDGNSIFTLDRSGPFYFISGNKDNCDKGQKLQIVVIS 90

Query: 129 VRN 121
            RN
Sbjct: 91  ARN 93


>gb|AAZ85253.1| CT099 [Solanum chmielewskii] gi|73808508|gb|AAZ85254.1| CT099
           [Solanum chmielewskii] gi|73808510|gb|AAZ85255.1| CT099
           [Solanum chmielewskii] gi|73808512|gb|AAZ85256.1| CT099
           [Solanum chmielewskii] gi|73808514|gb|AAZ85257.1| CT099
           [Solanum chmielewskii] gi|73808516|gb|AAZ85258.1| CT099
           [Solanum chmielewskii] gi|73808518|gb|AAZ85259.1| CT099
           [Solanum chmielewskii] gi|73808520|gb|AAZ85260.1| CT099
           [Solanum chmielewskii] gi|73808522|gb|AAZ85261.1| CT099
           [Solanum chmielewskii] gi|73808524|gb|AAZ85262.1| CT099
           [Solanum chmielewskii]
          Length = 301

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/63 (55%), Positives = 41/63 (65%)
 Frame = -2

Query: 309 NSVLVVDKDHYSACNTTKPIKSLESGLSYYNLDTPGRHYFISGKPGSCQKGQKLALVVLS 130
           +SVL V KD Y  CNT  PIK +E G S + LD  G  YFISG   +C KGQKL +VV+S
Sbjct: 31  DSVLEVSKDDYDKCNTGNPIKKMEDGNSIFTLDRSGPFYFISGNKDNCDKGQKLQIVVIS 90

Query: 129 VRN 121
            RN
Sbjct: 91  ARN 93


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