BLASTX nr result

ID: Coptis24_contig00036767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036767
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005090478.1| NADH dehydrogenase subunit 5 (mitochondrion)...   167   1e-39
ref|YP_005090448.1| NADH dehydrogenase subunit 5 (mitochondrion)...   167   1e-39
ref|YP_003587344.1| NADH dehydrogenase subunit 5 [Cucurbita pepo...   167   1e-39
ref|YP_003587253.1| NADH dehydrogenase subunit 5 [Citrullus lana...   167   1e-39
gb|ABZ79358.1| NADH dehydrogenase subunit 5 [Phyllostachys edulis]    166   2e-39

>ref|YP_005090478.1| NADH dehydrogenase subunit 5 (mitochondrion) [Lotus japonicus]
           gi|357197342|gb|AET62938.1| NADH dehydrogenase subunit 5
           (mitochondrion) [Lotus japonicus]
          Length = 669

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/85 (95%), Positives = 83/85 (97%)
 Frame = -3

Query: 255 SHFWANSLFVLPKNEILAESEFAAPTIIKLIPILFSTSGAFVAYNVNLVADQFQRAFQTS 76
           ++FWANSLFVLPKNEILAESEFAAPTIIKLIPILFST GAFVAYNVNLVADQFQRAFQTS
Sbjct: 490 TNFWANSLFVLPKNEILAESEFAAPTIIKLIPILFSTLGAFVAYNVNLVADQFQRAFQTS 549

Query: 75  TFCNRLYCFFNKRWFFDQVLNDFLV 1
           TFCNRLY FFNKRWFFDQVLNDFLV
Sbjct: 550 TFCNRLYSFFNKRWFFDQVLNDFLV 574


>ref|YP_005090448.1| NADH dehydrogenase subunit 5 (mitochondrion) [Millettia pinnata]
           gi|357197311|gb|AET62908.1| NADH dehydrogenase subunit 5
           (mitochondrion) [Millettia pinnata]
          Length = 669

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/85 (95%), Positives = 83/85 (97%)
 Frame = -3

Query: 255 SHFWANSLFVLPKNEILAESEFAAPTIIKLIPILFSTSGAFVAYNVNLVADQFQRAFQTS 76
           ++FWANSLFVLPKNEILAESEFAAPTIIKLIPILFST GAFVAYNVNLVADQFQRAFQTS
Sbjct: 490 TNFWANSLFVLPKNEILAESEFAAPTIIKLIPILFSTLGAFVAYNVNLVADQFQRAFQTS 549

Query: 75  TFCNRLYCFFNKRWFFDQVLNDFLV 1
           TFCNRLY FFNKRWFFDQVLNDFLV
Sbjct: 550 TFCNRLYSFFNKRWFFDQVLNDFLV 574


>ref|YP_003587344.1| NADH dehydrogenase subunit 5 [Cucurbita pepo]
           gi|259156821|gb|ACV96682.1| NADH dehydrogenase subunit 5
           [Cucurbita pepo]
          Length = 664

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/85 (95%), Positives = 83/85 (97%)
 Frame = -3

Query: 255 SHFWANSLFVLPKNEILAESEFAAPTIIKLIPILFSTSGAFVAYNVNLVADQFQRAFQTS 76
           ++FWANSLFVLPKNEILAESEFAAPTIIKLIPILFST GAFVAYNVNLVADQFQRAFQTS
Sbjct: 490 TNFWANSLFVLPKNEILAESEFAAPTIIKLIPILFSTLGAFVAYNVNLVADQFQRAFQTS 549

Query: 75  TFCNRLYCFFNKRWFFDQVLNDFLV 1
           TFCNRLY FFNKRWFFDQVLNDFLV
Sbjct: 550 TFCNRLYSFFNKRWFFDQVLNDFLV 574


>ref|YP_003587253.1| NADH dehydrogenase subunit 5 [Citrullus lanatus]
           gi|259156778|gb|ACV96640.1| NADH dehydrogenase subunit 5
           [Citrullus lanatus]
          Length = 666

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/85 (95%), Positives = 83/85 (97%)
 Frame = -3

Query: 255 SHFWANSLFVLPKNEILAESEFAAPTIIKLIPILFSTSGAFVAYNVNLVADQFQRAFQTS 76
           ++FWANSLFVLPKNEILAESEFAAPTIIKLIPILFST GAFVAYNVNLVADQFQRAFQTS
Sbjct: 490 TNFWANSLFVLPKNEILAESEFAAPTIIKLIPILFSTLGAFVAYNVNLVADQFQRAFQTS 549

Query: 75  TFCNRLYCFFNKRWFFDQVLNDFLV 1
           TFCNRLY FFNKRWFFDQVLNDFLV
Sbjct: 550 TFCNRLYSFFNKRWFFDQVLNDFLV 574


>gb|ABZ79358.1| NADH dehydrogenase subunit 5 [Phyllostachys edulis]
          Length = 670

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/85 (94%), Positives = 83/85 (97%)
 Frame = -3

Query: 255 SHFWANSLFVLPKNEILAESEFAAPTIIKLIPILFSTSGAFVAYNVNLVADQFQRAFQTS 76
           ++FWANSLFVLPKNEILAESEFAAPTIIKLIPILFST GAF+AYNVNLVADQFQRAFQTS
Sbjct: 490 TNFWANSLFVLPKNEILAESEFAAPTIIKLIPILFSTXGAFLAYNVNLVADQFQRAFQTS 549

Query: 75  TFCNRLYCFFNKRWFFDQVLNDFLV 1
           TFCNRLY FFNKRWFFDQVLNDFLV
Sbjct: 550 TFCNRLYSFFNKRWFFDQVLNDFLV 574


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