BLASTX nr result

ID: Coptis24_contig00036766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00036766
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269539.2| PREDICTED: ABC transporter B family member 1...    84   9e-15
ref|XP_004151914.1| PREDICTED: ABC transporter B family member 1...    77   2e-12
ref|XP_002321339.1| multidrug/pheromone exporter, MDR family, AB...    75   7e-12
ref|XP_002515660.1| multidrug resistance protein 1, 2, putative ...    70   2e-10
ref|XP_004169290.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...    64   1e-08

>ref|XP_002269539.2| PREDICTED: ABC transporter B family member 19-like [Vitis vinifera]
          Length = 1252

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/83 (55%), Positives = 58/83 (69%)
 Frame = +3

Query: 33  EPINVGHEPATQDIEQAGESIGDNQLRDLPIEEIQKYKSQTVSFFRIWFGLNEAELGKTA 212
           E  +   E + QD++Q+ E   +   RD   EE Q+ + + V FFRIWFGL ++EL KTA
Sbjct: 626 ENASTDQEISFQDLDQSEEP--NKHPRDALKEEEQRVRGKRVQFFRIWFGLKKSELIKTA 683

Query: 213 IGSLAAALSGISKPFFGFFIITI 281
           IGS AAALSGISKPFFG+FIITI
Sbjct: 684 IGSFAAALSGISKPFFGYFIITI 706


>ref|XP_004151914.1| PREDICTED: ABC transporter B family member 19-like [Cucumis
           sativus]
          Length = 1244

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/91 (46%), Positives = 60/91 (65%)
 Frame = +3

Query: 9   ESRDSTRGEPINVGHEPATQDIEQAGESIGDNQLRDLPIEEIQKYKSQTVSFFRIWFGLN 188
           ++  ++  EP +   E  + D++Q  +   +N   D   +E +K K + + FFRIWFGL+
Sbjct: 612 KNNSNSLSEPGSTHQEAQSSDLDQDEKPELENSKIDSMSQEEEKVKVKEM-FFRIWFGLS 670

Query: 189 EAELGKTAIGSLAAALSGISKPFFGFFIITI 281
           + E+ KT+ GSLAAALSGISKP FGFFIITI
Sbjct: 671 KIEIMKTSFGSLAAALSGISKPIFGFFIITI 701


>ref|XP_002321339.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222868335|gb|EEF05466.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1275

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
 Frame = +3

Query: 33  EPINVGHEPATQDIEQAGESIGDNQ-LRDLPIEEIQKYKSQTVSFFRIWFGLNEAELGKT 209
           E  +   +  + D++Q  E    N+ L   P++E QK + +   FFRIWFGL   +L KT
Sbjct: 645 ESASTNQQLLSADLDQHEERGEPNKHLCKPPLQEDQKGRKEASPFFRIWFGLEHKDLVKT 704

Query: 210 AIGSLAAALSGISKPFFGFFIITI 281
            +GS+AAA SGISKPFFG+FIIT+
Sbjct: 705 VVGSVAAAFSGISKPFFGYFIITV 728


>ref|XP_002515660.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223545203|gb|EEF46712.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 1289

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/54 (64%), Positives = 41/54 (75%)
 Frame = +3

Query: 120 PIEEIQKYKSQTVSFFRIWFGLNEAELGKTAIGSLAAALSGISKPFFGFFIITI 281
           P +E QK   ++  FFRIWFGL + EL +TAIGS AAA SGISKP FGFFIIT+
Sbjct: 689 PKQEEQKDIRKSAIFFRIWFGLQKKELLRTAIGSFAAAFSGISKPVFGFFIITV 742


>ref|XP_004169290.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
           19-like [Cucumis sativus]
          Length = 1229

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = +3

Query: 162 FFRIWFGLNEAELGKTAIGSLAAALSGISKPFFGFFIITI 281
           FFRIWFGL+  E+ KT  GS AAA+SGISKP FGFFIITI
Sbjct: 647 FFRIWFGLSNIEIMKTIFGSFAAAVSGISKPIFGFFIITI 686


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